| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1350 |
|---|
| Symbol | |
|---|
| ID | 8568000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1584102 |
|---|
| End bp | 1585193 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_003290627 |
|---|
| Protein GI | 268316908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.505877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGC AAACACCGCC CGTGATCCAT CGGCCGGAGG TCGTGCTGGT GACCGGAGGA
GCCGGCTTTA TCGGGTCGAA TTTTCTGCTC TACATGGTGC CCCGCTATCC CGAAGTGCAG
TTCATCAACC TGGACAGTCT GACCTACGCG GGCAATCTGC TCAACCTGCG GGATATCGAA
GACGCCCCGA ACTACCGATT CGTACGGGGC GACGTGGCCG ATGCGCCGCT GGTGGAGCGG
CTGTTCCGGG AGCACGGCAT TACCACGGTG GTGCACTTTG CCGCCGAAAG CCACGTGGAT
CGCTCCATCA TGACGCCGCT GTCGTTCGTG TTGACGAACA CGGTAGGCAC CGTTACGCTG
CTCGAAGCGG CGCGCAAGGC GTGGGGTGAC CATGCCGACC CCGAGCGCTT TCGGTTCTAC
CACATCTCCA CCGATGAGGT GTTCGGCAGT CTGGGACCGG AGGGCTACTT CACCGAATCG
ACGCCCTACA ACCCGCGCTC GCCGTATGCG GCTTCCAAGG CGGCCAGCGA CCACTTCGTG
CGGGCCTACT GGCACACCTA CGGCCTGCCT GTGGTGATTT CGAACTGCTC GAATAACTAC
GGTCCCTACC AGTTTCCCGA GAAGCTCATT CCGCTGGTCA TCCTGAACGC GCTGGAGAAC
CGCCCCATCC CCATCTACGG CAAGGGCGAA AACGTGCGCG ACTGGCTCTA CGTGCGGGAC
CACTGCACGG CCATCGAGCG CATTCTGCTT TCCGGGCAGA CCGGGCAGAC CTACCTGGTC
AGCGCGGGCT GCGAGCGCAA GAACCTGGAG CTGGTGCAGC AACTGCTGGA CCTGATCGAC
GAGGAACTGG GACGGCCCGT GGGCCAGTCG CGGCGGCTCA TCACGTTCGT CAAGGACCGG
CCGGGCCATG ACTTTCGCTA TGCGCTCGAT GCCTCCCGGC TACGAGAAGA GCTGGGCTGG
GCGCCGGCCT ACACGCTGGA AGAAGGGCTG CGCGAAACGG TCCGCTGGTA CCTGACGCAC
CGCGACTGGC TGGAGGCCGT GGCCGACGCG TCGTACCGTG CCTACTACGA AAAACAATAC
GCCTTGCGCT GA
|
|---|
| Protein sequence | MSKQTPPVIH RPEVVLVTGG AGFIGSNFLL YMVPRYPEVQ FINLDSLTYA GNLLNLRDIE
DAPNYRFVRG DVADAPLVER LFREHGITTV VHFAAESHVD RSIMTPLSFV LTNTVGTVTL
LEAARKAWGD HADPERFRFY HISTDEVFGS LGPEGYFTES TPYNPRSPYA ASKAASDHFV
RAYWHTYGLP VVISNCSNNY GPYQFPEKLI PLVILNALEN RPIPIYGKGE NVRDWLYVRD
HCTAIERILL SGQTGQTYLV SAGCERKNLE LVQQLLDLID EELGRPVGQS RRLITFVKDR
PGHDFRYALD ASRLREELGW APAYTLEEGL RETVRWYLTH RDWLEAVADA SYRAYYEKQY
ALR
|
|---|
| |