| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1305 |
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| Symbol | |
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| ID | 8567955 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1530501 |
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| End bp | 1531617 |
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| Gene Length | 1117 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | LigA |
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| Protein accession | YP_003290583 |
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| Protein GI | 268316864 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.926199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAA AAATTCAAAG CCTGTTAGAG CGTGTGGACA CGCTCGGGAG GTTTCTTTGA
CATCCCCGGG CGTAAAGAGA AAATCGCGAA GCTGAACGAG GAGCGCCTGG CGCCGGGCTT
CTGGGACAAC CCGGAGCGGG CGCGTGAGGT CGAAAAGCAA ATCGCCGAAG AAGAGTCCTG
GGTGGCGGCG TGGGAGCAGC TGCGTCGCCA GGCCGATGAT GTACAGACGC TGCTGGAACT
CCAGCAGGAG GAGCCCGACG CGAACCTGGA AGAAGAGATC GCGCGGGAAG TGGCCCGCCT
GGAGCAGCAG CTCGACGAGC TGGAGCTGCG CAGCCTGCTG ACCGATCCCG ACGACCACCG
GAACGCCATC CTGACCATTC ATCCGGGGGC CGGCGGGACG GAAAGCCAGG ACTGGGCCGA
AATGCTCCTG CGCATGTACA CGCGCTGGGG CGAACGACAC GGCTACGACG TGGAGCTGCT
CGAATACCAG GCGGGCGACG TGGCCGGCAT CAAGAGCGCC ACGCTGCGCA TTGCCGGACC
CTACGCCTAC GGCTACCTGA AGGGAGAATC CGGCGTGCAC CGGCTGGTGC GCATCTCGCC
GTTCGATGCG AGCGGCCGAC GCCATACGTC CTTTGCCAGC GTGTTCGTCT ATCCGGAGAT
CGACGACTCG ATTGAGGTCG ACATCCGGCC CGACGAGATC GAAATGCAGA CGTTTCGCAG
CGGTGGAAAA GGCGGACAGA ACGTCAACAA AGTGGAAACG GGCGTCCGCC TGATCTGGCA
CGGCAAGCTC TCGAACGGTG AGGAGGCCAG AGTCGTGGCC GAGTGCACCG AAGAACGCAG
CCAGCTTCAG AACCGGCAGC GGGCGCTCAC CATGCTCAAA AGCCGGATCT ACCAGCTGGA
GCGGGAGATC CGCGAGGCCG AAAAGCGCAA GCGGGAGTCC CAGAAGAAAA AGATCGAGTG
GGGGAGTCAG ATTCGTTCCT ACGTTTTCCA GCCCTACACG ATGGTCAACG ACCATCGCAC
CGAAACGAAA GTGACGGACG TCCAGGCTGT CATGGACGGT GACCTGGACC CGTTCATCCG
GGCCTACCTG CTGTCGCAGG TGAACGAAGC CGCCTGA
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| Protein sequence | MQEKIQSLLE RVDTLGRFLD IPGRKEKIAK LNEERLAPGF WDNPERAREV EKQIAEEESW
VAAWEQLRRQ ADDVQTLLEL QQEEPDANLE EEIAREVARL EQQLDELELR SLLTDPDDHR
NAILTIHPGA GGTESQDWAE MLLRMYTRWG ERHGYDVELL EYQAGDVAGI KSATLRIAGP
YAYGYLKGES GVHRLVRISP FDASGRRHTS FASVFVYPEI DDSIEVDIRP DEIEMQTFRS
GGKGGQNVNK VETGVRLIWH GKLSNGEEAR VVAECTEERS QLQNRQRALT MLKSRIYQLE
REIREAEKRK RESQKKKIEW GSQIRSYVFQ PYTMVNDHRT ETKVTDVQAV MDGDLDPFIR
AYLLSQVNEA A
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