Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1249 |
Symbol | |
ID | 8567897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1461429 |
End bp | 1462967 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Citrate transporter |
Protein accession | YP_003290527 |
Protein GI | 268316808 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.221461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGGCC CGCTTGTCGT ATGTCTGTGG TTGTTGCCGG TGGCTTCGGC CCTGGCGCAG GAAGCACCGG CCGCCGAGGC GCCGGCCACC GAGGCCGTCG AAGCCGAACA TGCCCCCGAC ACGTCGGCGA CGGTTGCGCA TGCCGAAGAA GCGGCGCACG CGGCGGCCGA TGAGCACGGA CCGCGTCCGC CGGTCTGGCT CGTGCTGCCG TTTGTGATCC TGCTGGTGAT GATCGCCACC GGGCCGCTGT TCTACCCGCA CCACTGGCAT CACCACTATC CGAAGTATGC TGTCGGGCTG GGGCTGTTCG TCTCGCTCTA CTACATCTTC GGGCTGGGAT CGACCACGCC CGTGGTGCAT GCCATCGAGG AGTATCTGTC GTTCATTGCC CTGGTGGCTT CGCTTTTCAT TGCGGCCAGC GGCATCTACA TCAACATCAA CGCGAAGGGT ACGCCCCGCA ACAACGCCAT CCTGTTGTTT GTCGGATCGC TCGTGGCGAA CCTGATCGCC ACCACGGGCG CGGCCATGCT TTTCGTACGC AGCTACATGC GCCTGAACAA AGGACGGCTC AAGCCCTACC ACCTGATTTT CTTCATCTTC CTGGTTGCGA ACGTGGGCGG TGGGCTGACG CCCATCGGCG ACCCGCCGCT GTTTCTGGGC TTTCTGCGCG GGGTACCGTT CTTCTGGACG CTGACGCATG TGTGGTTCGT CTGGCTGCCG ACGGTGCTGC TGATCCTAGC CGTCTTCTAC GTGATCGACG CGCGCAACAA GATCGAGAGT CCGGATCCGG ATCCGTCGCA GCCGCTCGTG CAGATCCGGG GTGCCAAAAA CTTTCTCTGG GTGCTGGTGA TCATCCTGTC GGTGTTCATC GACCCGAACG TCTTCGAGTG GGTGCCGGAC CTGCACGAGC TCTACCACAT TCCGTTCGGC ATCCGCGAGA TCATCATGTT CTCGGTGGCC GTACTGGCCT ACAAACTGGC CGACAGAGAG GCGCTCCGGA AGAACGAGTT CACCTTCGAG CCCATTCGTG AGGTGGGCTG GCTGTTTCTG GGTATCTTCG CCACGATGCA GCCAGCGCTT CAGCTCATCA GCCTGTTCGC GCACGACCAT GCCGAGCAGC TCACGGTAGG CATGTTCTAC TGGGGGACGG GCTCGCTCTC CAGCGTGCTC GATAACGCGC CCACCTACCT GAACTTCCTG GCGGCGGCCA TGGGTAAATT CGGGCTCGAC GTGAACGTGC CCGAGCAGGT GAGGGCCTTC GCCGAAGCGA GTGTGCATCC GGAGACCTGG TTCTACCTGC AGGCGATCTC CATTGCGGCC GTATTCTTCG GCGCCATGAC GTATATTGGC AACGCGCCCA ACTTCATGGT GAAGGCGATC GCCGAGGAAA ACAAGGTGGA CATGCCTTCT TTCATGGGCT ATGTGACGAA GTACTCGCTG CCGATTCTGA TTCCGATTTA CTTCCTGATT TACCTGCTGT TTTACAGCGG GCTGTTTCCG GGACTGGATG CCTTCTTTGA ACAGTTACTG ATTCGATAG
|
Protein sequence | MLGPLVVCLW LLPVASALAQ EAPAAEAPAT EAVEAEHAPD TSATVAHAEE AAHAAADEHG PRPPVWLVLP FVILLVMIAT GPLFYPHHWH HHYPKYAVGL GLFVSLYYIF GLGSTTPVVH AIEEYLSFIA LVASLFIAAS GIYININAKG TPRNNAILLF VGSLVANLIA TTGAAMLFVR SYMRLNKGRL KPYHLIFFIF LVANVGGGLT PIGDPPLFLG FLRGVPFFWT LTHVWFVWLP TVLLILAVFY VIDARNKIES PDPDPSQPLV QIRGAKNFLW VLVIILSVFI DPNVFEWVPD LHELYHIPFG IREIIMFSVA VLAYKLADRE ALRKNEFTFE PIREVGWLFL GIFATMQPAL QLISLFAHDH AEQLTVGMFY WGTGSLSSVL DNAPTYLNFL AAAMGKFGLD VNVPEQVRAF AEASVHPETW FYLQAISIAA VFFGAMTYIG NAPNFMVKAI AEENKVDMPS FMGYVTKYSL PILIPIYFLI YLLFYSGLFP GLDAFFEQLL IR
|
| |