Gene Rmar_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1123 
Symbol 
ID8567769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1299254 
End bp1299982 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003290402 
Protein GI268316683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCTC TGGAAGTTTT ATTCCAGCGC TCCGATCCGG AGCTAAAAGA TACACCCCGT 
GTGCGGCGCG GACCCATTCG CATTTTCGTC GTGGACGATC ATCCGGCTAT TCAGGAAGCC 
CTTGCGGCCA CGGTAAGCAG CGAGGCGGAT CTGGAGCTGG TGGGAAGTGC GCGCACGGCC 
GCCGAGGGCA TGAAGCGAAT CCGAGCGTTG CGGCCGGACG TGGTGGTGGT GGACATCTCG 
CTGGAAGATG CGCACGGACT GGACCTGGTG CATCAGATTC GGGCCGAACT GCCCGAAACG 
CAGGTGATCG TCTTTTCTAT GTACGACGAG GTGGCCTATG CCGAGCGGGC CATCCGAGCC 
GGCGCCATGG GCTACGTGAT GAAGAGCGAA TCGACGCAGA GCGTCGTGGA GGCCATCCGG 
ACGGTCATGC AGGGCGAGGT GTACCTGAGC CACCGCATGG CCTCGCGCAT TCTGAGCAAG 
GTGGTCCGGG GCCGAAGCGT CCAGCCGCAT GTGCTGTCGC TTGATATGCT GACCGACCGG 
GAGATGGCCG TCTTTCAACT ACTCGGGCAG GGCTATTCGA TCGAGGAGAT CATGCAGCGG 
TTGAACCTGA GTCGGAAGAC GGTCGAGACC TACCGCCGCC GCGCCAAGGA AAAACTGGGC 
TTTTCGTCGG TCGGCGAGCT ACTGCAGTTT GCGGTGCAGT GGACCTATCG GCATACCCGC 
CAGGAATAG
 
Protein sequence
MMALEVLFQR SDPELKDTPR VRRGPIRIFV VDDHPAIQEA LAATVSSEAD LELVGSARTA 
AEGMKRIRAL RPDVVVVDIS LEDAHGLDLV HQIRAELPET QVIVFSMYDE VAYAERAIRA 
GAMGYVMKSE STQSVVEAIR TVMQGEVYLS HRMASRILSK VVRGRSVQPH VLSLDMLTDR 
EMAVFQLLGQ GYSIEEIMQR LNLSRKTVET YRRRAKEKLG FSSVGELLQF AVQWTYRHTR 
QE