Gene Rmar_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1100 
Symbol 
ID8567741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1271684 
End bp1272307 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSNARE associated Golgi protein-related protein 
Protein accessionYP_003290379 
Protein GI268316660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000402259 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGGC TGGCCGATCT GACGCAGTGG GCGCTACAGG TGCCGCCGTT CTGGGTATAT 
GTGGCGCTGC TGGTGATTGC CTACGGCGAA AACGTGGTGC CGCCCATTCC CGGCGATCTG 
TTCGTCGTGT TCTGTGGCTA CCTGGCGGGG CGGGGCACGC TGGAGCTGTG GCTGGTGATT 
CTGCTTTCGA CCATAGGAGG CGCAGCCGGC TTCATGACCA TGTACGCGGT GGGCTACCGG 
ATCGGAACGG CCGTGCTGGA CCCCGAGCGA CTTCGCTGGC TTCCCAAGCA GCGTATCTAC 
CAGGTGCAAC GCTGGATGCA GCGCTGGGGC TACGGGATCG TGGCGGCCAA TCGGTTTCTG 
AGCGGCGCCC GCTCGGTCAT TTCGCTGACC GTAGGCATGG CCCACATGCG TCCGGGCAAG 
ACGGCCCTGC TGGCTACCCT CAGCGCATTT GTGTGGACCA CGCTGATCGC CTATCTGGGC 
TATGCCGTCG GCGAAAACTG GCCTGTCGTG CGCCATTATC TGCAGCTTTA CGGCTGGGTC 
GTGCTGGGGG TGCTGGGTCT GATCGCGCTG GTTGTGGCCG TCCGCGCCTG GTGGCGTCGC 
ACCCGGACGA CGCGCGTTTC ATGA
 
Protein sequence
MDWLADLTQW ALQVPPFWVY VALLVIAYGE NVVPPIPGDL FVVFCGYLAG RGTLELWLVI 
LLSTIGGAAG FMTMYAVGYR IGTAVLDPER LRWLPKQRIY QVQRWMQRWG YGIVAANRFL 
SGARSVISLT VGMAHMRPGK TALLATLSAF VWTTLIAYLG YAVGENWPVV RHYLQLYGWV 
VLGVLGLIAL VVAVRAWWRR TRTTRVS