Gene Rmar_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0879 
Symbol 
ID8567517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp990022 
End bp993894 
Gene Length3873 bp 
Protein Length1290 aa 
Translation table11 
GC content65% 
IMG OID 
Productacriflavin resistance protein 
Protein accessionYP_003290164 
Protein GI268316445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA CCGATCTTGC CATACGCCAG CGTACCACGG TCCTTGTGCT GACCGTACTG 
CTGGCCGTCG GAGGGCTGGT CAGCTACCTG ACCATTCCCA AGGAGTCCTT TCCCTCCATC
GAAATCCCCA ATATCGTCAT CACAACGGTG TACCCCGGCG CCAGTCCGGA GGACATCGAG
TCGCTGATCA CCAAGCCCAT CGAAGAAGAG CTGCAGGGCA TTACCGGGAT CGACGAGATC
CGCTCGACCT CGACGGAGGG CGTCTCGACG ATCGTGGTGG AATTCATGCC CGACCAGATC
TCGCTGGACG AGGCGTTCCA GAAGGTGCGG GATAAAGTGG ACATCGCGAA GGCGGAGCTG
CCCGAGGATG CCGAGGAGCC GATCGTCAGC GAGATCGACC TCTCGGAGCT GCCCATCATG
ACGATCAACC TGGCGGCGCC CTACGCGCTT TCGCGCCTGA AGGAAGTGGC CGAGGACCTT
TCGGACGAAC TGGAGGCGCT GCCGGACGTG CTGGAGGCCA CGGTCGTGGG CGGCCTGGAG
CGTGAGGTGC AGGTGAACGT CGATCGCGCG GCGTTGCAGG CCTATAACCT GACCTTCAAC
GACGTCATCA ACGCCATCCA GCGCGAAAAC ACGAACCTGC CGGGCGGCTC CATCGACGTG
GACCGGCTCA ACTACCTGGT GCGTGTGGAC GGAGAGTTCG AGGTGCCGGA GGAGATCAAC
AACATTGTGA TCAAAGCGCC GAACGGTAAG CCGATCTACG TGCGTGACGT GGCCGAGGTG
GTCTTCGGCT ACAAAGAGCG CGACAGCTAC GCTTATCTGC GCGTGCTGCA ACGCGAAGAA
GACGGTCGCC TGGTGCCCGT CCACAATCAG TCCGGCGAGC CGCTGCAGGT GGTGAGCCTG
AGCATCCGCA AGCGCTCGGG GGCCAACATT CTGGAGACCA CCGAGGCCAT CCGCCAAGTG
CTCGACCGCT TCCCCTTCCC GGCCGGCACC GAGGTGGTCA TCACGGGCGA CCAGAGCGAG
GACGTGCGAA CGCTCGTTCG CGACCTGGAA AACAACATCA TCAGCGGATT GATCTTCGTG
GTGGCGGTGC TGCTGTTCTT CCTGGGCGTG CGCACGGCCA CGCTCGTGGG CATTGCCATT
CCGCTGTCGA TGTTCACCTC GTTCCTGGTC TTCCAGGCGC TCGGCTACAC GCTCAACTTC
GTCATTCTCT TCTCGCTGAT CATCGCGCTG GGCATGCTCG TCGACAATGC CATCGTCATT
GTCGAGAACA TCTACCGCTT CCGGGAGCAG GGCTACAGTC GCTTCGAGGC GGCCCGGCTG
GCCACAGCCG AGGTGGGCGG GGCCGTGGTA GCCTCGACGG CCACGACGGT GGCGGCGTTC
GTGCCCATGC TCTTCTGGCC CGGCATTATC GGCGAGTTCA TGAGCTTTCT GCCGCTGACG
CTCATCATCA CGCTTACCTC GTCGCTGTTC GTGGCGCTGG TGATCAACCC GGTGCTGACC
GGCTACTTCA TGCGCGTAGA GGGCGAAAAA GCGCCGCGTC CGCCCCGGCG GGTGCGTGTG
CTGGCGGCCG CCGTGATCCT GACGCTGGGG CTGGTGCTGG GGCTGGCCAA CTGGAAAACG
CTGGTAGTGC TGGCCGTCGC CGTTCCGGTG ATCTACCTGC TCCACCGCTA CATTTTCAGC
CCGATCGGCA ACTGGTTCAT CCACCACGGC CTGCCGGGCC TGATCCAGCG CTACCGGGCC
TTCCTGAGCT GGATGCTGGA GCGGGACTAT TCGGTGCGGC ATGCGCTGCT GCGCAACACG
TTCGCGCTGG GAAGCTTCAC GCTGGGCGTG GTGCTGCTGG TGCTGGGCGG CGGCCTTTCG
GCCCTGCTGG GCGGCGGTCC GGCCGGGATG GTGCTGACGG TTCCCGGCAC CATCCTGGCG
GTGGTGGGTC TGATCGGCAT CGTGCTGCAC ACGCTCGAGA CACTTTTTCT GGGCGGCTGG
GCGACGGTGC GCGGCGGGTT GATCTTCGGT GCCGTGGTGC TCGTCATCAC CGGCCTCATG
TACCTGAGCC CGCGCGAAGT GGCCCTCACC ACGATCGTCG AGCTGCTGAC GCTGCCGCTG
CTCATCATCG TCGTCGGTCT GCTGGGCGCG TTGCTGAACC GCCGGGGCCG TCGCTACCTG
ATCCTCACGG ACAATCGCGC CCGCCTGCTC AACAGCGTGC TCGGCGCGCT CTTCGCGATT
CTGGCGATGT TCGCCATTGC ACCCACGGGC GTCGAGTTCT TCCCGAAGAC CGACCCCAAC
CAGATTCAGG TCACGCTGAC GGCCCCGCTG GGCACGAACG TCGAGACGAC CGATCGGATC
GCCCGCGAGG CGCTGGCCCG TATCGAGCAG CTACTGAACG AGCATCCGGA AGACCGGGCC
AACGTCAAAA ACATTCAGGT GAACGTGGGG GTGGGCGGCG ACCGGATGTT CGGCGGCGGC
TCGTCGAAGC CCGAGGTGGC CACGATCACG CTGGATCTGG TCGATTACGA AGACCGGGCC
GTCTCCAGCC GCGAGACGCT TGACCGGCTG CGCCGCCAGT TGCAGGGCAT CCCCGGCGTG
ACGATCAAGA TCGATCAGGA CAATCCGGGA CCGCCCACCG GGCCGCCGGT GAACATCGAA
ATCTCCGGCC CCGAGTTCAC GGAGATCGTG CGCATCACGC AGGAAATCAA GCAGCGGCTG
ATCGAAGCCG CCGCGACAGG CCGCATTCCC GGTCTGGTGG ACATTACCGA CAACCTGAAC
ACGGGGCGGC CGGAGCTGCG CGTGCGCATC GACCGGGAGC GGGCCGGACG TTTCGGGCTG
AGCACGCAAC AGATCGCCTC CACCGTGCGG GCCGCCATCA ACGGTATCGA GGCCAGCCAG
TACCGCACGG GCGAGGACGA ATACGACATC ACCGTCCGGT TGAAGGAGGC CGACCGTCGC
TCGCTCGAAA GCCTGCGTAA CCTGACCATT CTGCACGAAG GCCAGCAGAT TCCGCTGGCG
GCCGTGGCCG ACTTCGAGCT GGGCGGCGGA CTCGGCGCCA TCACGCGCCT GGACCTGCAG
CGCGTCGCCA CCGTCAGCGG CGACGTGGCA CCCGGCTACA ATGCCCAGGC CGTGTTGCAG
CAGGTGCGCC AGTACCTGGC CGACTACGAG CGGTCGCTGC CGCCGGGCTA CCACCTGGCC
TACACGGGCG AAAACGAAGA GCAGCAGGAG TCGTTCAGCT TTCTGACCAC GGCGCTGCTC
ATCGGCTCGG CGCTGATCTT TCTGATCATG ATCGCCCAGT TCAACCGCGT CAGCGGACCG
TTCCTGATCA TGATCGCCGT GGGGCTGAGC CTGATCGGCG TGCTGTTGGG CCTGATCCTT
ACGCGCACGG CCTTCGGACT GATGACCTTC ATCGGGCTGA TCTCGCTGGC CGGCATCGTG
GTCAACAACA ACATCGTGCT GATCGACTAC ACGATGCAGC TTCAGCGACG CGGACTCAGC
AAGCACGACG CGATCATCGA GGCTGGCGCC ACACGCCTGC GTCCCGTGAT CCTGACGGCG
CTGACCACCG TGATCGGCCT GGTGCCGCTG ACGTTCGGCA TCAACATCGA CTTTGTGGGA
TTGCTGATCA ACTGGGAGCC CAACTTTCAG CTTGGCTCGG AAAACACCCA GTTCTGGGGG
CCGATGGGCA CGGCCATTAT CAGCGGGTTG ACGTTCGGGA CGTTCCTGAC GCTGGTGATC
ATGCCCGTGC TCTACTCGTC GTTCGACTCG GTCGCCAACC ATCTGCGGCG TTTCCTGGGA
CGCGCGCCCG TGGCGGCCGA GGTGGGCAAC GGCGCAACGG ACACCCCGCC GGCCGACGTA
GAAACCCGGC CAAGCGCTGT GTCCCGGCGC TGA
 
Protein sequence
MKITDLAIRQ RTTVLVLTVL LAVGGLVSYL TIPKESFPSI EIPNIVITTV YPGASPEDIE 
SLITKPIEEE LQGITGIDEI RSTSTEGVST IVVEFMPDQI SLDEAFQKVR DKVDIAKAEL
PEDAEEPIVS EIDLSELPIM TINLAAPYAL SRLKEVAEDL SDELEALPDV LEATVVGGLE
REVQVNVDRA ALQAYNLTFN DVINAIQREN TNLPGGSIDV DRLNYLVRVD GEFEVPEEIN
NIVIKAPNGK PIYVRDVAEV VFGYKERDSY AYLRVLQREE DGRLVPVHNQ SGEPLQVVSL
SIRKRSGANI LETTEAIRQV LDRFPFPAGT EVVITGDQSE DVRTLVRDLE NNIISGLIFV
VAVLLFFLGV RTATLVGIAI PLSMFTSFLV FQALGYTLNF VILFSLIIAL GMLVDNAIVI
VENIYRFREQ GYSRFEAARL ATAEVGGAVV ASTATTVAAF VPMLFWPGII GEFMSFLPLT
LIITLTSSLF VALVINPVLT GYFMRVEGEK APRPPRRVRV LAAAVILTLG LVLGLANWKT
LVVLAVAVPV IYLLHRYIFS PIGNWFIHHG LPGLIQRYRA FLSWMLERDY SVRHALLRNT
FALGSFTLGV VLLVLGGGLS ALLGGGPAGM VLTVPGTILA VVGLIGIVLH TLETLFLGGW
ATVRGGLIFG AVVLVITGLM YLSPREVALT TIVELLTLPL LIIVVGLLGA LLNRRGRRYL
ILTDNRARLL NSVLGALFAI LAMFAIAPTG VEFFPKTDPN QIQVTLTAPL GTNVETTDRI
AREALARIEQ LLNEHPEDRA NVKNIQVNVG VGGDRMFGGG SSKPEVATIT LDLVDYEDRA
VSSRETLDRL RRQLQGIPGV TIKIDQDNPG PPTGPPVNIE ISGPEFTEIV RITQEIKQRL
IEAAATGRIP GLVDITDNLN TGRPELRVRI DRERAGRFGL STQQIASTVR AAINGIEASQ
YRTGEDEYDI TVRLKEADRR SLESLRNLTI LHEGQQIPLA AVADFELGGG LGAITRLDLQ
RVATVSGDVA PGYNAQAVLQ QVRQYLADYE RSLPPGYHLA YTGENEEQQE SFSFLTTALL
IGSALIFLIM IAQFNRVSGP FLIMIAVGLS LIGVLLGLIL TRTAFGLMTF IGLISLAGIV
VNNNIVLIDY TMQLQRRGLS KHDAIIEAGA TRLRPVILTA LTTVIGLVPL TFGINIDFVG
LLINWEPNFQ LGSENTQFWG PMGTAIISGL TFGTFLTLVI MPVLYSSFDS VANHLRRFLG
RAPVAAEVGN GATDTPPADV ETRPSAVSRR