Gene Rmar_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0726 
Symbol 
ID8567364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp840236 
End bp841105 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003290012 
Protein GI268316293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAG GAAACATGCG CGCGGTTCTT CTGCTGGGCA TGGCCCTGCT GGCCGTCGTG 
TTGACCCCTG TGACCACCCG CGCCCAGCAG GCGGACGAGT ACAAGAAGGT TTTCAATCAG
GCGCTTGAAG ACGCCAAGGC CAAGCAGTAT CAGAAGGCGT ACGACGGTTT CCTGAAAGCC
GCCCAGATGG CCAAACAGGC CAACGATCAA GACGTCGCCC AGAAAGCGCT GCGCATTGTC
GCCCAGCTCG ACTACAACTT CGGCCTGCGG GCCTATCGCA ACGAGCAGTA CGACAAGGCG
CTGGAGCACT ACACGAAAGG GGTCGAGCAC GACCCGTCCT ATCCGAAGAA CTACCTGGGC
AAAGGGCTGG CGCTACTCAA GCTCAACCGC ATTGACGAGG GGCTCGAAAC ATTGAAGCAG
GCGCTGGCCG TCAGCAAGGA GGCACAGGAT CGTGAGTCGC TCCAGGCCGC CGAAAAGGCC
ATTCGGGACC ATTACCTCTA CCTGGCCTCC AGCACGCTGG CCCGCAACGG CGGCAATCCG
AATCCCTCGG ACGCCCGTGA AGCCATCGGC TACCTGGACG AACTCTTACA GATCGAAGAC
GTCTCGCCCG ACGCCGACGT ATACTACTAC TACGCCGAGG CGCTGAAGAC GCTGGGAGAG
TATCAGAAGT CTGTGGAAAT GGCCCAGAAG GCGCTGGAGC TGCACCGGGG TAGCCGCACG
GACAAGGCCA AGATCTACTT CGTGATGGGC GAGGCCTACA TGCTGATGGG CGACAAAGAG
AAAGCCCGCG AGGCCTTCAG CAACGCGCTC TACGGTAGCT ACAAGGCGCC GGCCGAGCAC
TACCTGTCGC AGCTTTCCTC GTCGCGATAA
 
Protein sequence
MQKGNMRAVL LLGMALLAVV LTPVTTRAQQ ADEYKKVFNQ ALEDAKAKQY QKAYDGFLKA 
AQMAKQANDQ DVAQKALRIV AQLDYNFGLR AYRNEQYDKA LEHYTKGVEH DPSYPKNYLG
KGLALLKLNR IDEGLETLKQ ALAVSKEAQD RESLQAAEKA IRDHYLYLAS STLARNGGNP
NPSDAREAIG YLDELLQIED VSPDADVYYY YAEALKTLGE YQKSVEMAQK ALELHRGSRT
DKAKIYFVMG EAYMLMGDKE KAREAFSNAL YGSYKAPAEH YLSQLSSSR