Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0726 |
Symbol | |
ID | 8567364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 840236 |
End bp | 841105 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003290012 |
Protein GI | 268316293 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAAAG GAAACATGCG CGCGGTTCTT CTGCTGGGCA TGGCCCTGCT GGCCGTCGTG TTGACCCCTG TGACCACCCG CGCCCAGCAG GCGGACGAGT ACAAGAAGGT TTTCAATCAG GCGCTTGAAG ACGCCAAGGC CAAGCAGTAT CAGAAGGCGT ACGACGGTTT CCTGAAAGCC GCCCAGATGG CCAAACAGGC CAACGATCAA GACGTCGCCC AGAAAGCGCT GCGCATTGTC GCCCAGCTCG ACTACAACTT CGGCCTGCGG GCCTATCGCA ACGAGCAGTA CGACAAGGCG CTGGAGCACT ACACGAAAGG GGTCGAGCAC GACCCGTCCT ATCCGAAGAA CTACCTGGGC AAAGGGCTGG CGCTACTCAA GCTCAACCGC ATTGACGAGG GGCTCGAAAC ATTGAAGCAG GCGCTGGCCG TCAGCAAGGA GGCACAGGAT CGTGAGTCGC TCCAGGCCGC CGAAAAGGCC ATTCGGGACC ATTACCTCTA CCTGGCCTCC AGCACGCTGG CCCGCAACGG CGGCAATCCG AATCCCTCGG ACGCCCGTGA AGCCATCGGC TACCTGGACG AACTCTTACA GATCGAAGAC GTCTCGCCCG ACGCCGACGT ATACTACTAC TACGCCGAGG CGCTGAAGAC GCTGGGAGAG TATCAGAAGT CTGTGGAAAT GGCCCAGAAG GCGCTGGAGC TGCACCGGGG TAGCCGCACG GACAAGGCCA AGATCTACTT CGTGATGGGC GAGGCCTACA TGCTGATGGG CGACAAAGAG AAAGCCCGCG AGGCCTTCAG CAACGCGCTC TACGGTAGCT ACAAGGCGCC GGCCGAGCAC TACCTGTCGC AGCTTTCCTC GTCGCGATAA
|
Protein sequence | MQKGNMRAVL LLGMALLAVV LTPVTTRAQQ ADEYKKVFNQ ALEDAKAKQY QKAYDGFLKA AQMAKQANDQ DVAQKALRIV AQLDYNFGLR AYRNEQYDKA LEHYTKGVEH DPSYPKNYLG KGLALLKLNR IDEGLETLKQ ALAVSKEAQD RESLQAAEKA IRDHYLYLAS STLARNGGNP NPSDAREAIG YLDELLQIED VSPDADVYYY YAEALKTLGE YQKSVEMAQK ALELHRGSRT DKAKIYFVMG EAYMLMGDKE KAREAFSNAL YGSYKAPAEH YLSQLSSSR
|
| |