Gene Rmar_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0513 
Symbol 
ID8567147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp577618 
End bp578304 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003289803 
Protein GI268316084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.985837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGTC CGATTTTACT GGTGGAAGAC GAGATCGCCA TGGCGGCCCT GTTGCGTCAG 
GGGTTGGAGG AAGAGGGCTA CGCGGTCGAA TGGGTGCTCA CCGGCGAAGA AGCCCTGGCG 
CGCCTGGAGC ATCTGGAGCC GGCCCTGCTG GTGCTGGACG TACGACTGCC GGGCATGGAT 
GGCGTGGAAG TGTGCCGCCA GGTACGCCAG CGCTGGCCGG ATCTACCTGT TCTGATGCTG 
ACGGCCCTCG ACGATGTCGA AAATCGCGTG CGCGGGCTAC GAGCCGGTGC CGACGACTAT 
CTGCCCAAAC CGTTCGCCTT TGAAGAACTG CTGGCCCGGA TCGAAGCCCT GCTGCGCCGA 
AGCAAGCGCC AGCCCACCCG CCACCTGCTG CGCAATGGTC CGCTCACGCT CGACCTGAAC 
GCCCGCACCG CCACCTGTGG CGAGCGCACG CTTTCCCTTA CGCCGCGCGA ATTCGATCTG 
CTGGCCTACC TGATGCAACA CCCCCGTCGG GCGATTTCGC GGCTGCAGAT CTACCGCGAA 
GTGTGGGGCC ACGACTTCGA CCACGGCACC AGCCTGCTCG AAGTGTATAT CAGCTACTTG 
CGCCGCAAAT TGCAGGAAGC AGGCTGCCCG GGCTACATTG CAACGGTCCG GGGCGTCGGT 
TACCGCTATG AACCGGCCGA AGGGTGA
 
Protein sequence
MPRPILLVED EIAMAALLRQ GLEEEGYAVE WVLTGEEALA RLEHLEPALL VLDVRLPGMD 
GVEVCRQVRQ RWPDLPVLML TALDDVENRV RGLRAGADDY LPKPFAFEEL LARIEALLRR 
SKRQPTRHLL RNGPLTLDLN ARTATCGERT LSLTPREFDL LAYLMQHPRR AISRLQIYRE 
VWGHDFDHGT SLLEVYISYL RRKLQEAGCP GYIATVRGVG YRYEPAEG