Gene Rmar_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0471 
Symbol 
ID8567105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp516951 
End bp518624 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content62% 
IMG OID 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003289761 
Protein GI268316042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAC TGGACTGGTT AATCGTGGCG GCCTATTTCG CGATCCTGGC CGGGATCGTC 
TGGTGGTCGG CCCGCCGCGT CAAGACCACC ACGGACTATT TCCTGGCCGG CCGCGACGTG
GGCTTTTTCG TCATCGGCGC CTCGATTTTC GCTTCGAACA TCGGCTCGGA GCACATCGTG
GGGCTGGCCG GAAGCGGTGC GGCCAACGGC CTGGCCCAGG CGCACTGGGA GCTGCACGCC
TGGATTCTGG TGCTGCTGGC CTGGGTGTTC GTGCCGTTTT ACTACCGCTC GGGCGTTTTC
ACGATGCCGG AGTTTCTCGA GCGGCGCTTC AACAGCCGCG CGCGCTGGAT TCTGGCCGTG
GTGTCGCTGA CGGCCTACGT GTTCACGAAG GTGTCGGTGA CGGTCTATGC GGGGGCGCTG
GTGTTTCGGA CGCTGCTGGC CGACGTGTTT GGTTCGCCGG ACCAGGCGTT CTGGGTGGGG
GCGATTGCGA CGGTGCTGGC CACGGGGATT TACACGATTC TGGGGGGGCT TCGGGCGGTG
GTTTACACCG AGGTGTTGCA GACGGGGTTG TTGATTCTGG GGAGTGTGTT CATCACGGTG
TTCGGACTTT CGGCGCTGGG GGGCTGGGGC GAGCTGCGGG AGGTGGCGCG CCTGCAGGGC
GAGCAGTGGG CCCTGTGGCG CTCGAACAGT GATCCGGTGT TTCCGTGGCT GGGCGTGATG
ATTTCCTCGC CGATCGTGGG CATCTGGTAC TGGTGCACGG ACCAGTACAT TGTGCAGCGG
ACGCTGGCGG CGCGTTCGCT CAAGGATGCA CGTCGGGGCG CGCTCTGGGG TGGTTTTCTG
AAGGTGTGGC CGGTGTTCAT TTTTCTGGTG CCGGGGATGA TCGGCTATGC GCTGCACCAG
AAGGGGTTGA TTCACATTCC GACGGACGCC ACGGGGAAGA TTCAGGGCGA CATGGTCTTT
CCGACGCTGG TGGCGGAGTT GTTGCCGCTG GGCCTGCGTG GGCTGGTCGT CGGCGGCCTG
CTTTCGGCAT TGATGTCGTC GCTTTCGTCG CTGTTCAATT CGTGCGCGAC GCTTTTCACG
GTGGACATTT ACGAGAAGCT TCGTCCGGGT CGCCCGGAGC CGGAGCTGGT GCGTGTGGGA
CGGATTGCGA CGGCGGTGGT GGTGGGGCTG GGCTTGCTGT GGATTCCGAT CATGAAGGTG
ATGGCCGAGT CGAAGGCGGG GTTGTACGAC TATTTGCAGA ACGTGCAGGG TTTTCTGGCG
CCGCCGATCA CGGCGGTATT TCTGCTGGGA TTGGCCAGTC GTCGCATCAA TGCGAAGGGT
GCGGTGTGGG GGCTTGGTGT TGGTTTTGTG CTGGGGCTGT TGAAGTTGAC GTTGCAGTCG
ATGGTGCAGA ACGGGGCGCT GGATCCGAAT ACGCTCCTGG GCGCAATCGG TGCGTTTAAT
GGCTATTACT TCTCCGGACT GTTATTTTTC GTGAGCGTGG CGATTGTGGT GGGTGTGTCG
TTGCTGACGG AGGCGCCGCC GGAGGAGAAG GTTCGGGGGT TGACGTTTGG TACGGTGTCG
GCGTCGGACC GGTCTGAGAG TCGGAAGACG TGGGACTGGC GGGATGTGAC GTTGACGGTG
GTGGTGCTGG GGCTGGTGCT GGCGATTTAT CTGTACTTCT CCTTCTGGGT GTAA
 
Protein sequence
MTVLDWLIVA AYFAILAGIV WWSARRVKTT TDYFLAGRDV GFFVIGASIF ASNIGSEHIV 
GLAGSGAANG LAQAHWELHA WILVLLAWVF VPFYYRSGVF TMPEFLERRF NSRARWILAV
VSLTAYVFTK VSVTVYAGAL VFRTLLADVF GSPDQAFWVG AIATVLATGI YTILGGLRAV
VYTEVLQTGL LILGSVFITV FGLSALGGWG ELREVARLQG EQWALWRSNS DPVFPWLGVM
ISSPIVGIWY WCTDQYIVQR TLAARSLKDA RRGALWGGFL KVWPVFIFLV PGMIGYALHQ
KGLIHIPTDA TGKIQGDMVF PTLVAELLPL GLRGLVVGGL LSALMSSLSS LFNSCATLFT
VDIYEKLRPG RPEPELVRVG RIATAVVVGL GLLWIPIMKV MAESKAGLYD YLQNVQGFLA
PPITAVFLLG LASRRINAKG AVWGLGVGFV LGLLKLTLQS MVQNGALDPN TLLGAIGAFN
GYYFSGLLFF VSVAIVVGVS LLTEAPPEEK VRGLTFGTVS ASDRSESRKT WDWRDVTLTV
VVLGLVLAIY LYFSFWV