Gene Rmar_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0260 
Symbol 
ID8566890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp275257 
End bp276840 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003289554 
Protein GI268315835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCGT GGAGTAAACG GCTGGTCTGG GTGGGGTTGC TGCTGGGCCT GACGGCCGGC 
GACGGGCGGG CGCAGTCAAA AGCCGACTGG AGCCGGCGCG TGGCCGAGCT GATTCCGGTC
CCGGGCATCG CCGAGAACTT CGTCAGCAAC CTGGCCGCCC GCGGCGACTC GCTCTGGGTG
GGGCCGCGCC TGGACCTGAC CTTCGACGGG GGACAGACCT GGTACCGGGC CGATGTCGAT
TCGATCACGC AGGGACGCGG CCGCGTCTAT GCGCTGCTGG TAGTGGGCGA CACGATCTGG
GCCAGCCTGG GCACGCGCTA CCAGGCCGAC CTGAACGGCG ACGGCGTGGA CGACGACGTG
TTCGAGGCCG TGGGGCTGGT CTATTCCACC GACGGCGGCA ACACGTGGGG CTTCCGCTTT
CCGCCGCTCG ACGCACCCAC CGACACGGTG ATCACCTACG GCGTCTCGCG ATTGCTGGCC
GAGCCGGTCG TCTCCCCGCA GCTCACCACG ACGTTCGACC TGGCCTACGA TCGGCGGCGC
GGCCGGCTCT GGGCGGCGAG CTGGTACGGC GGCCTGCGCT ACTCGGACGA CTTCGGCCGC
ACCTGGCATC GGGCCGTGCT CCCGCCCGAC TCGCTCGACG CGCTTCGTCC CGATCAGCCC
TATTTCTTCC GCGTAGCGCC GCCCGTCAGC GCGCTGGACC GCTACGACAA CTACTTCGCC
TTTGCCGTGC ATGTGGACGA CGAGGGGACC GTCTGGGCCG GCACGGCCGG AGGCATCAAC
CGCTCGGTGG ACGGCGGACT GAGCTGGGAT CGCTTCTTCA ACGACGGCCG CCCCAACGCG
CCCACCGGCA ACTGGATCGT GGCCATCGCC GAGCAGCGCC GACCCAACGG CCAGCGTGTG
CTGTGGTTCG CCACGCGGCC GGCCGGCGCC ACACCCGGCG AGACGTTCGG CATCACGCGG
ACGGCCGACG GTGGCCGCAC CTTCCAGCAG GTGCTGCTGG GCGAGCGCAT CAACGACTTC
GCCTTCCGGG GCGACACCGT CTACGCCGCG GGCGACAACG GGCTGTTCGT CTCGACGGAT
CAGGGGCGCA CCTGGCGCAC CATTCGCGAC TTTTACGATC CCGCTTCGAA CCGCATCGTG
CGACCCGACG TGCGCGTGCT GGCCGTGGCC GTGACGCGCT CGCATCTGTG GATCGGGACT
TCCGACGGCC TGCTTCGAAG CGACGACGGC GGGCGCACCT GGCGGCTGTT CCGGGCCGAT
GTGCCGCTTC GTCCCGACAA TCCCTCGCCG GCCGTCCCCC GCGTCGATAC CTACGCCTAC
CCGAACCCGT TCTCGCCCGC ACTCGATGCG TTCGTGCGCA TTCGCTACGA GCTGGACCGA
GAGGCCACGG TGCGCGTGCA CGTGTTCGAC TTCGGCCTGC AGCGCGTGCG CACGCTCTTC
GAAGGAACGC AGCCGGCCGG CCCGCACGAA GTGATCTGGG ACGGACTCGA CGCCCGCGGC
GTGCGTGTGG CCAACGGCGT GTACTTCTAC GCGGTGGAGA CGGGCTCGGC CACCTACTGG
GGCAAAATTC TGGTGATCGA ATGA
 
Protein sequence
MWSWSKRLVW VGLLLGLTAG DGRAQSKADW SRRVAELIPV PGIAENFVSN LAARGDSLWV 
GPRLDLTFDG GQTWYRADVD SITQGRGRVY ALLVVGDTIW ASLGTRYQAD LNGDGVDDDV
FEAVGLVYST DGGNTWGFRF PPLDAPTDTV ITYGVSRLLA EPVVSPQLTT TFDLAYDRRR
GRLWAASWYG GLRYSDDFGR TWHRAVLPPD SLDALRPDQP YFFRVAPPVS ALDRYDNYFA
FAVHVDDEGT VWAGTAGGIN RSVDGGLSWD RFFNDGRPNA PTGNWIVAIA EQRRPNGQRV
LWFATRPAGA TPGETFGITR TADGGRTFQQ VLLGERINDF AFRGDTVYAA GDNGLFVSTD
QGRTWRTIRD FYDPASNRIV RPDVRVLAVA VTRSHLWIGT SDGLLRSDDG GRTWRLFRAD
VPLRPDNPSP AVPRVDTYAY PNPFSPALDA FVRIRYELDR EATVRVHVFD FGLQRVRTLF
EGTQPAGPHE VIWDGLDARG VRVANGVYFY AVETGSATYW GKILVIE