| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0217 |
|---|
| Symbol | |
|---|
| ID | 8566847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 230578 |
|---|
| End bp | 231492 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase |
|---|
| Protein accession | YP_003289511 |
|---|
| Protein GI | 268315792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG CCCCGATCAC TTCGACCGAC TGGCCTCCTT ACCTCGACGA AGCCACGCTG
GACCGTCTGA TCCGGCAGTG GCTGGCCGAA GACATCGGTC CGGGCGACGT CACCACCGAG
GCCACCGTGC CCCCCGAGCG ACAGGCCCGC GGGCTCTTCC TGGCGAAAGC AAACGGCGTC
GTGGCCGGAC TCCAGGTGGC CGCGCGCGTC TTTCAGCTCG TCGATCCCGA CGTGCACGTC
CGCTGGCACC AGGCGGACGG CTCGCGCGTG ACGGCCGGCA CCATCTTCGG CACGGTGGAA
GGCCGCGCCC GCAGCTTGCT CATGGCCGAG CGCCTGGCGC TGAATCTGCT GCAACGCATG
AGCGGCATCG CCACGGCCAC CCGCCGCCTG GTGGAACGCG TCCGACCTTA CGGCACCAAA
GTGCTCGACA CCCGCAAGAC CGCCCCGGGA CTCCGGCTGC TGGACAAATG GGCCGTGCGC
CTGGGCGGCG GCACCAACCA CCGCCTGGGC CTCTACGACA TGATCCTGAT CAAAGACAAC
CACATCGTGG CGGCCGGCGG CATCCGCGAA GCCATCGAAG CCGCCCGACG CTATCGGGAG
CAGCACCGGC TCGACATTCC CATCGAGATC GAAGCGCAAT CGCTGGAAGA CGTCGATGCC
ATTCTCGCCA CGGGCGGCGT CGACTGGATC CTGCTGGACA ACTTCGCCCG GCACCTGCCC
GACGGCACGC TCGACGTCGA GCCCCTCCGA GAGGCCGTCC GGCGCATCGG CGGCCGCTTC
CACACGGAAG CTTCCGGTAA CATCACGCTC GAAACGGCCG AGGCCATCGC CGCCACCGGC
GTCGAGGCCA TCTCCTGCGG CGCCCTGACC CACTCCGTAC AGGCACTCGA CCTGTCGCTG
GAACTCACCC TGTAG
|
|---|
| Protein sequence | MSAAPITSTD WPPYLDEATL DRLIRQWLAE DIGPGDVTTE ATVPPERQAR GLFLAKANGV
VAGLQVAARV FQLVDPDVHV RWHQADGSRV TAGTIFGTVE GRARSLLMAE RLALNLLQRM
SGIATATRRL VERVRPYGTK VLDTRKTAPG LRLLDKWAVR LGGGTNHRLG LYDMILIKDN
HIVAAGGIRE AIEAARRYRE QHRLDIPIEI EAQSLEDVDA ILATGGVDWI LLDNFARHLP
DGTLDVEPLR EAVRRIGGRF HTEASGNITL ETAEAIAATG VEAISCGALT HSVQALDLSL
ELTL
|
|---|
| |