| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0141 |
|---|
| Symbol | |
|---|
| ID | 8566766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 153816 |
|---|
| End bp | 154937 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_003289437 |
|---|
| Protein GI | 268315718 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.195967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTTG GATGGCTGCT TGCCTGGCTG GTGCTGGGTT GCGGCCAGGA GAAGCCGGCG
TTGCCGGTAT CCGAATCGGT CACGGAGGTT TCGGCCGACA CGCAACATAG CGTGCTGGTG
CAGCTCGATT CGCTGCAGGT GGCCCGATTG GAGGCGGCGC TGGATAGCTT GAGCTGGGAG
GTCGGGCGGT TGCGCCAGAT GCTGGAGCAA GCTGGAGTCT CTGAGGCGAC GTCTGCGGCG
CTGGCCGATA CGGTACGGGC CATTACCCGA CAACAGCTGG CCGATACGGC CCGCCAAGTA
GGCTACCTGG GTCTGCGCGT AGTCTGGGCC ACGTTTGTGC TGGTGCTCAC CTATTTTCTG
GTGCGCTGGA GCGTCTGGTT GCTTGATATG ATGGCCGAAC GCCGCGCTGC TCGGCGTCTG
TTCTTCAAAC GACTGATTCC GGTCGTCCGC TTGTTGCTCT GGATGGGCGC CATCTATTAT
GTGATGGGAG GCATCTTCGG GGTCGATCGC GAAGGCTTGC TGGCCGCTTC GGCGGTGCTG
GGCGTAGCGG TTGGCTTTGC CGCGCAGGAT GTGCTCAAAA ACATTTTTGG TGGCATCCTG
ATCATCTTCG ATCAGCCGTT TCAGGTGGGT GACAAAGTAC GTATTGGCGG CACCTATGGC
GAAGTGGTCT CCATCGGCTT GCGTTCCACC CGAATCGTTA CTCCCGACGA CAATCTGGTT
TCGGTGCCCA ACGCGCAGGT GGTCGAAGGA CAGGTGGCCA ATGCCAATGC TGGCGCGCTT
GACTGTCAGG TCGTGGTCGA TCTGTATCTA CCAGGCTGGG TCGATGTGAT GAAGGCCAAA
CAGATCGCTT ACCAGGCGGC CGCTTCGTCG CAGTATGTGT ATCTCAAAAA ACCGATCGTC
GTCAATGTGC GCGATGAGTT TCACGACATG TTTTTGCTGC ACCTGATCGT AAAAGCCTAT
GTGCTGGATA CGCGGTACGA GTTCGCCTTC GCCAGCGAAG TGACCGAGAT CGCCAAGACC
GAATTTTTGC GTCAGGGACT ATTGACCCCG ATGACGACCC GGATTCCATG GGCACTGGAA
GGAGATCTCC ACAACCCATC CCGAGCGCCC CATGAATCCT GA
|
|---|
| Protein sequence | MVLGWLLAWL VLGCGQEKPA LPVSESVTEV SADTQHSVLV QLDSLQVARL EAALDSLSWE
VGRLRQMLEQ AGVSEATSAA LADTVRAITR QQLADTARQV GYLGLRVVWA TFVLVLTYFL
VRWSVWLLDM MAERRAARRL FFKRLIPVVR LLLWMGAIYY VMGGIFGVDR EGLLAASAVL
GVAVGFAAQD VLKNIFGGIL IIFDQPFQVG DKVRIGGTYG EVVSIGLRST RIVTPDDNLV
SVPNAQVVEG QVANANAGAL DCQVVVDLYL PGWVDVMKAK QIAYQAAASS QYVYLKKPIV
VNVRDEFHDM FLLHLIVKAY VLDTRYEFAF ASEVTEIAKT EFLRQGLLTP MTTRIPWALE
GDLHNPSRAP HES
|
|---|
| |