Gene Rmar_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0130 
Symbol 
ID8566755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp139449 
End bp140510 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotein of unknown function DUF1028 
Protein accessionYP_003289426 
Protein GI268315707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAGC AAGCGGCTCT GCGGTTGCTC GGGGTACTGC TGGGCGGCCT GGCGTTGATT 
TTCGTACCGA TGCATTCGGC CGGAGATCGA ACGCCCCTGG TGGCCACGTT TTCCATTGTC
GGCTACGATC CGGCCACGGG CGAACTGGGC GTGGCTGTGC AGTCGAAGTT TCCGAATGTG
CGGCCGATCG TGCCGTGGGC GCGGGCGGGC GTCGGGGCCG TGGCCACGCA GAGCTATGCG
GAGCTGGATT ATGCGCTGAA GGGACTCGAA CTCATGGCGA ACGGCGCCAC GGCCGAAGAA
GCGCTGCGCA TCGTGCTCCG GCAGGACGAA GGGCGTCAGC TCCGACAGGT GGGGATCGTG
GACGCGCACG GAAACGCAGC CAGCTGGACG GGTACCGAGT GCTTTCCGTG GGCCGGCGGA
CGTGTCGGCC AGCGCACGGG CGAGCCGGCC GCCGCCACGC CCGGCCATGT GGTGACGGGC
TACGGCTACA CGGCTCAGGG CAACATCCTG GTCTCGGAAG AAACCGTGGT GGCCATGGCG
CGGGCCTTCG AGGAGACGCA GGGACCGCTG GCCGAGCGCC TGCTGGCCGC CCTCAAGGCC
GGCCAGGAAG CCGGTGGCGA TCGGCGCGGA CAGCAGAGCG CCGCGCTGCT TGTCGTACGC
GAAGGCGCCG GCTACGATGG CCTCGACAAC TACATCGACA TCTCCGTCTA CGATCATCCC
CGACCCATCG ACGAGCTGAT CCGGCTCTAC GAACTGAACA AGCTCTACTT TACGCCCGGG
CGGCCCGAAG ACCTGATCCC CGTCACGCCG GAAATCGCCC GCGAATTGCA GCAGATCTGG
AAGGATCGGG GCTTTTACGA CGGCCCCATC AATGGCGTGG TCGATACCAC CTTCCAGCGC
ATTCTGATCG ATTTCATGGG CTGGGAAAAC TACGACATGC GTATTCCGGC CATCGAGGCT
GTGGATCTGA CGGCGGGCGA CACGCTCAAG ATCGACCGCG TCATGCTGGA ACACATCCGG
AAGGTCTACC GCGAGGGCCG CTGGGTGCCC CGTCGCCGGT GA
 
Protein sequence
MRKQAALRLL GVLLGGLALI FVPMHSAGDR TPLVATFSIV GYDPATGELG VAVQSKFPNV 
RPIVPWARAG VGAVATQSYA ELDYALKGLE LMANGATAEE ALRIVLRQDE GRQLRQVGIV
DAHGNAASWT GTECFPWAGG RVGQRTGEPA AATPGHVVTG YGYTAQGNIL VSEETVVAMA
RAFEETQGPL AERLLAALKA GQEAGGDRRG QQSAALLVVR EGAGYDGLDN YIDISVYDHP
RPIDELIRLY ELNKLYFTPG RPEDLIPVTP EIARELQQIW KDRGFYDGPI NGVVDTTFQR
ILIDFMGWEN YDMRIPAIEA VDLTAGDTLK IDRVMLEHIR KVYREGRWVP RRR