Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0076 |
Symbol | |
ID | 8566701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 81510 |
End bp | 84023 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | glycoside hydrolase family 9 |
Protein accession | YP_003289373 |
Protein GI | 268315654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGGT ATCTGTTGCT GCTGAGCTGG TTACTGGTTC GAGCCGGCTT CGGTCAGTCG GAAGGCTTCG TGCTGAACGA GCGCGAGTAC TTCGAGCGGG AAGGTGTAAG CGTAATGGTC TTTCAGGATT TTTATCCGGA AGGCCATCAG AGCGGCGTGA CGCTCGTTCA GCATGGCGAG CGCGTGGCGG CCAACGGCGA CGTGCGTCTC GAGGCGACGC CGGGTCAGTG GCAACCCGTT CCGCGTCTGC TCCGGCGCGA GGTGCATCCG GAGCGCAACG AGATCGTGGC CTACCTGGCC TATCCAGATC CTGACCGCGA TCGCAAAGGC TTCAATCCGA TCTTTTACCC GGACCTGCAC CTGACCTATC GGGTGCGCGT GCGCGGCGAG ACCGACGGCG TGCGCATCAT CGTGGACCTG GACGAACCGC TCCCGGAAGC ATGGGCGGGC AGGGTAGGCT TCAACCTGGA GCTGTTTCCC GGGGCGCTTT TCGGCAAGAG CTGGTACATG GACGACGCGG CGGGCATCTT TCCGCGTCAG CCGAACGGGC CGGTCCGCAT TAACGACGCG GGCGAAGTGG AGGCCGTCCC ACTGGCCACG GGCCGCCGCC TGCTGGTGGC CCCGGAGTCG GACGCGCTGC GGCTGGAGAT CGAAAGCCTG CGGGGTGAGC TGGCACTGTA CGACGGCCGC GTCCAGCACA ACAACGGCTG GTTCGTGGTA CGCACGGCCA TCCCGGCCGG GTCAACCACG AACGCTGTCG AGTGGGTGGT GCGACCGCAC GTGATTCCGG GCTGGCGCTA CACGCCGGTG TTGCAGGTCT CCCAGGTGGG GTACCATCCG CGTCAGCCCA AGGTGGCCGT GCTGGAACTG GACGCCCGCG ACGACCTGCA GGGCACCGTC TATCTGCTAC GCCTTGGCGA AGACGGCACG ACCGACACGG TACTGGCCGG ACCGCCCGTG CCCTGGAACG GCCGCTTCCT GCGTTACCGC TATGCGCACT TCGATTTCAG CCGCGTTACC CGGCCGGGCC TGTACATGTT GGCCTTTCGG GGCGTGCGCT CGCATCCGTT CCGGATCGCT CCCGACGTGT ACCGGCGCCA CGTCTGGCAA CCCACGCTGG AGTTCTTTCT GCCCGTGCAG ATGTGCCACA TGCGCGTGGA GCAGCAGTAC CGGGTCTGGC ACGGCGCCTG CCACCTGGAC GACGCCCGTA TGGCCCCGCC CGACACGAAC CACATCGACG GCTACGTGCA GGGACCGGAG CTGCGCGCAC CCTATGCACC CGGCGAGCAC GTGCCGGGCC TGAATGTGGG CGGCTGGCAC GACGCGGGCG ACAACGACCT GCGCATCGAA TCGCAGGCCG ACGAGGTCTT CATCCTGGCC ACGATGTACG AACTGTTCGA GGTGCTGAAA ACCTACGACA ACACGACAAT TGACCAGCGG CGACGCCTGA CCCAGATCCA CCAGCCCGAC GGACGGCCGG ACGTGCTCCA GCAGATCGAA CACGGCGTGC TGAGCATTCT GGGAGGCTAC CGGGCGCTGG GGCGGCTCTA CCGGGGAATC ATCGCCCCCA CGCTCAAGCA GTACGTGCTC ATCGGCGATC CGGCCAACAG TACGGACAAC CGCATCTACG ATCCGTCCGT CCCGCCCGAA ACCCTCTCGG CGCTGCGCGT GGACGCCCGC GACCCTCGCT GGGTGGTCAC GACGGCCGAC GACCGCTGGG TCTTCACCGA AAGCAACCCG GCCCACGAAT ACAAGGGCAT CGCGGCACTG GCTGCGGCCG GACGCGCCCT GCGTTCTTAC AATCCGGAGC TGGCCCGTGC CTGCGTGGAG GCGGCCGAGG CGCTCTGGCA ACAGGAACGC GACACGTCGC GGGGCTTCGA CGAGCGCGTG GTGGCCGCCG TCGAGCTTTT CCGCACCACC GGCCGCGATC TCTACCGCCG GACGCTGCTG AACGACCGCG ACCGGATCGT GGCCCGCATC GGAAGCGTCG GCTGGGCGGT CGGTACGATC CTTCCGACCC TGGGCGACTC GGCCTTTACC GTAGCGGTGC AGGCCGCCGT GGCGCGCTAC ATGGATGAAG TGCACCGGCT CCAACAGGAA AACCCCTACG ACGTGCCCTA TCGCCCGCGC ATCTGGGGAG CCGGCTGGGA CATCCAGCGC TTCGGCGTCC GCCAGTACCT GCTGCACCGC GCCTTCCCGG ACCTGGTCCC GCCCGACTAC GTCTTCAACG CACTCAACTT CGTGCTGGGC GTACATCCGG GTCGGAACAC GGCCGCGTTC GCCTCGGGCG TCGGCGCCCG TTCGGTCACC GTGGCCTATG GCTTCAGCCG TGCCGACTGG ACGTACATCC CGGGCGGTGT CGTTTCGGGG ACGGCCCTGA TTCGCCCCGA TTTCCCCGAA CTCAAGGAAT TCCCTTACCT GTGGCAACAG GTCGAGTACG TGATGGGCGG CGGCGCCACC CACTTCATGT TTCTCGTGCT GGCTGCCGAT CAACTGCTGA ACGCTACACG CTGA
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Protein sequence | MRRYLLLLSW LLVRAGFGQS EGFVLNEREY FEREGVSVMV FQDFYPEGHQ SGVTLVQHGE RVAANGDVRL EATPGQWQPV PRLLRREVHP ERNEIVAYLA YPDPDRDRKG FNPIFYPDLH LTYRVRVRGE TDGVRIIVDL DEPLPEAWAG RVGFNLELFP GALFGKSWYM DDAAGIFPRQ PNGPVRINDA GEVEAVPLAT GRRLLVAPES DALRLEIESL RGELALYDGR VQHNNGWFVV RTAIPAGSTT NAVEWVVRPH VIPGWRYTPV LQVSQVGYHP RQPKVAVLEL DARDDLQGTV YLLRLGEDGT TDTVLAGPPV PWNGRFLRYR YAHFDFSRVT RPGLYMLAFR GVRSHPFRIA PDVYRRHVWQ PTLEFFLPVQ MCHMRVEQQY RVWHGACHLD DARMAPPDTN HIDGYVQGPE LRAPYAPGEH VPGLNVGGWH DAGDNDLRIE SQADEVFILA TMYELFEVLK TYDNTTIDQR RRLTQIHQPD GRPDVLQQIE HGVLSILGGY RALGRLYRGI IAPTLKQYVL IGDPANSTDN RIYDPSVPPE TLSALRVDAR DPRWVVTTAD DRWVFTESNP AHEYKGIAAL AAAGRALRSY NPELARACVE AAEALWQQER DTSRGFDERV VAAVELFRTT GRDLYRRTLL NDRDRIVARI GSVGWAVGTI LPTLGDSAFT VAVQAAVARY MDEVHRLQQE NPYDVPYRPR IWGAGWDIQR FGVRQYLLHR AFPDLVPPDY VFNALNFVLG VHPGRNTAAF ASGVGARSVT VAYGFSRADW TYIPGGVVSG TALIRPDFPE LKEFPYLWQQ VEYVMGGGAT HFMFLVLAAD QLLNATR
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