Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_7130 |
Symbol | |
ID | 8022497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 543578 |
End bp | 546292 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833966 |
Product | ABC transporter related |
Protein accession | YP_002985100 |
Protein GI | 241667016 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.444817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA GCCTCGCCCG CTACATCTGG AAGAACACGC GGCTGCAGCA GCTGTGGATT CTGGCTGTCG TCGCCGCCTC GATGGTGCCC TACTTCCTGT CCTTCGACCT GCCGAAGCAG ATCGTCAACG GACCGATCCA GGGTGACGGC TTCGAGGGCC CGGGCGCGAC GCAGACCTTC ATGCACATTG CCTACGACCT GCCTCTGATC GGCCATGTCG AATTCTTTCA AGGGTTGCAG CTCAACCGCT TCCAGATGTT GATGGCCCTC AGCCTGGTGT TTCTGGCGCT GGTGGTGCTG AACGGCCTCT TCAAATTCTA CATCAACACC TATAAGGGCC GGCTCGGCGA GCGCATGCTG CGCCGTATCC GCTTCGAGCT GATCGACCGG GTGCTGCGCT TTCCGCCCAT TCACTTCAAG CGGGTAAAAT CGGCCGAAAT CGCCACCATG ATCAAGGACG AGGTGGAGCC GATGGGCGGC TTCACCGGCG ATGCCTTCGT CTCCCCTGCC CTTCTCGGCG GCCAGGCGAT CACGGCGCTC GCCTTCATCA TCGTCCAGAA TTTCTGGCTC GGCATGATCG CCGCCGGCAT TGTCGGCGTG CAGGCGATCG TCATTCCGCG CATGCGCAAG CGCCTGCTCG AACTCGGCCG CCAGCGGCAG CTGACGGCGC GCGAGCTCTC CGGCCGCGTC GGCGAAATCG TCGAGGGCAT CGGCACGATC CACGGCAACG ACACATCCAA CCTCGAACGC GCCGACATCG CCTCGCGGCT CGGCCGGATC TTCTCGATCC GCTACGACCT TTACCAGTGG AAGTTCCTGG TGAAGTTCAT CAACAATTTC CTCGCCCAGG TCACGCCTTT CCTGTTTTAC GCGATCGGCG GCTATCTGGC GCTGCAGGGC CGGCTCGACA TCGGCCAGCT GGTCGCCGTC ATATCAGCCT ACAAGGACCT GCCCGGTCCG CTGAAGGAAC TGATCGACTG GGACCAGATG CGCCAGGACG TGCAGGTGAA GTACCAGCAG GTCTACGAGC AGTTCAATGT CGAGCCGCTG ATCGACAGCC GCATCCAGGA ACTCGCAACC GCCCCGGTCG GCGCGCTGAC GGGCGCGTTC GTGGTCACCA ACCTGTCGCT CTCAGACGAC AGCGGCGCCC GCCTCGTCGA CCACGTTTCC GTCGAGATCA AGCCGAACGA GACGGTGGCG ATCGTCGGGC CGAACGGCAG CGGCGCGGAA GCCTTCGCCG AAGCGCTCGG CCGCATGGTC TGGCCAGACT CCGGCCGCAT CACCATCGAC GGCCGCGATC TCCTCGAGAT GCCGGAATCG ATCACCGGCC GGCGCATCTC CTATGCCTCG TCCGACACCT TCTTCTTCCA CGGCACGCTC GCCAGCAATC TGCTCTACGG CCTGAAACAT GCGCCGATGA CCGATCCCGT GTACGACGAG CGGGAAGCGC TGGAGTATAA ATGGCATTCC GCCGAGGCGG AGAAGGCCGG CAACCCGACG CTCGACCTCA ACAGCGACTG GGTGGACTAC AAGGCCGCCG GCGCCAGCGG GCCCGAGGAC ATTCTAAAAG CGATCCGCCC GGTGCTCGAC GCCGTCCTGA TCTCGCAGGA CATCCTCGAC CTGGCGCTGC GCTCGACCGT CAACACCGAC GTGCATGTGG CGCTCGGCGA CCACGTCGTG GCGCTACGCG CCTCGCTCAG GGACCGGCTG CGCGACGAGG GGCTCGACAC CATCGTCGTG CCTTTCGATT TCGATGCCTA TAACGCCCAG GCGACGGTCG GCGAGAACCT GCTCTTCGGC ACGATGAAGC GGCCTTTGAT GACCAACCGC AGGCTTGCCG CGCATCCCTA TTTCCAGCAG CTCTTCCGTG AGACCGGGCT CAGCACCGAT CTCTACGACA TGGGCCTCGA GATCGCCGAG AACGCGGTGG AACTCTTCCA CGACCTGCCG CCGGACCATC CTTTCTTCCA GCAGCTGACC TTCATGACGG CCGACGACAT TCCGACCTAC CAGGCGCTGC TGCAGAAGCT GCAAAGCCGC CGCTTCGAGG ACGCCACGCC CGAGGAGCGT TCGGCCATCA TCCGGCTGAG TTTTGCCTAT ATCGAGCCGC GCCACCGCTT CGGCTTGCTG ACGAACGAGC TGATGGACAA GATCGTCAGC GCCCGCAAGC AGTTCCACGA GCATATTCCG GCCGATCTCG CCGAGCTGAT CGAGCGCTAC GACGCCGAGC GTTTCACCCC GTCGGCAAGC CTGATGGACA ATGTGCTTTT TGGCCGTATC GCCTATCAGC AGGCCGACGC CTCCGACCGC CTCCGCGGCA TCATGGGCGA ACTCTTCGAC GCGCTCGATC TTTATGACGA CGTGCTGTCG ATCGGCCTCG AATTCGACGT CGGCTCCGGC GGCAAACGGC TGACCATGGT GCAGCGGCAG AAGCTGAACC TGGCCCGCGC GCTGTTGAAG CGCTCGGATT ATTTCATCTT CAACCGGCCG CTGTCGGCGC TCGACCAGCG CGTTCAGGAT CAGATCACCC GCAACATCAT CGAGAACCTG CACGAGGAAG GCCATCGGCC GGCGATCATC TGGGTGCTTT CCAATGCCCG GCTGGCGGAG ATGTTCGACC GGATCCTGCT CTTCGACCGC GGCGGATTGG CGGAAGCCGG AAACTTTCCG GAACTTTCCG AGAAAAACGG GATGTTCAAG GAACTGTTAT CGTAA
|
Protein sequence | MEKSLARYIW KNTRLQQLWI LAVVAASMVP YFLSFDLPKQ IVNGPIQGDG FEGPGATQTF MHIAYDLPLI GHVEFFQGLQ LNRFQMLMAL SLVFLALVVL NGLFKFYINT YKGRLGERML RRIRFELIDR VLRFPPIHFK RVKSAEIATM IKDEVEPMGG FTGDAFVSPA LLGGQAITAL AFIIVQNFWL GMIAAGIVGV QAIVIPRMRK RLLELGRQRQ LTARELSGRV GEIVEGIGTI HGNDTSNLER ADIASRLGRI FSIRYDLYQW KFLVKFINNF LAQVTPFLFY AIGGYLALQG RLDIGQLVAV ISAYKDLPGP LKELIDWDQM RQDVQVKYQQ VYEQFNVEPL IDSRIQELAT APVGALTGAF VVTNLSLSDD SGARLVDHVS VEIKPNETVA IVGPNGSGAE AFAEALGRMV WPDSGRITID GRDLLEMPES ITGRRISYAS SDTFFFHGTL ASNLLYGLKH APMTDPVYDE REALEYKWHS AEAEKAGNPT LDLNSDWVDY KAAGASGPED ILKAIRPVLD AVLISQDILD LALRSTVNTD VHVALGDHVV ALRASLRDRL RDEGLDTIVV PFDFDAYNAQ ATVGENLLFG TMKRPLMTNR RLAAHPYFQQ LFRETGLSTD LYDMGLEIAE NAVELFHDLP PDHPFFQQLT FMTADDIPTY QALLQKLQSR RFEDATPEER SAIIRLSFAY IEPRHRFGLL TNELMDKIVS ARKQFHEHIP ADLAELIERY DAERFTPSAS LMDNVLFGRI AYQQADASDR LRGIMGELFD ALDLYDDVLS IGLEFDVGSG GKRLTMVQRQ KLNLARALLK RSDYFIFNRP LSALDQRVQD QITRNIIENL HEEGHRPAII WVLSNARLAE MFDRILLFDR GGLAEAGNFP ELSEKNGMFK ELLS
|
| |