| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7088 |
|---|
| Symbol | |
|---|
| ID | 8022374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 498917 |
|---|
| End bp | 499558 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644833925 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002985059 |
|---|
| Protein GI | 241666975 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAAG AAGAATTCGT CTTCCTCCTG ATCGGCCTGA AATGGACCGT GCTCCTGTCG
GCCGTCGGCT TTGTCTGCGG CGGCATCGCG GGGCTCGGCG TCGCCCTTGC GCGCGCCTCG
GGCATACCGC TGCTGGAACG TCTGACGGCC GGCTACATCG CCGTCTTCCA GGGAACCCCG
CTGCTGATGC AGCTTTTCGT CGTCTATTAC GGCCTGGCGC TGGTGGGGCT GATGCTCGAT
TCCTGGGTGG CCGTCGCCAT CGGACTGACG CTGCACGCCA GCGCCTATCT CGGCGAGATC
TGGCGCGGAT CGATCGAAGC GGTTCCGCGC GGCCAGACGG AAGCGGCAAA GGCTCTCAGC
CTCAGATACA TCTCGCGCAT GAAGGATGTC ATCCTGCCGC AGGCGCTGCG CGTTTCGCTG
CCAGCCACGA TCGGCTTCCT GGTGCAACTG ATCAAGGGCA CCTCGCTTGC GTCGATCGTC
GGCTTCACCG AGCTGACGCG GGCCGGCAAC ATCATCTCCA ACCAGATTTT CCAACCGCTG
ACGGTCTTCG GCGTCGTCGG CATTCTCTAT TTCCTGATGT GCTGCCCACT GACGATTCTT
GGTGCTCGCC TCGAACGAAG GTTCGCCGCC TCCGCGCGCT GA
|
|---|
| Protein sequence | MGQEEFVFLL IGLKWTVLLS AVGFVCGGIA GLGVALARAS GIPLLERLTA GYIAVFQGTP
LLMQLFVVYY GLALVGLMLD SWVAVAIGLT LHASAYLGEI WRGSIEAVPR GQTEAAKALS
LRYISRMKDV ILPQALRVSL PATIGFLVQL IKGTSLASIV GFTELTRAGN IISNQIFQPL
TVFGVVGILY FLMCCPLTIL GARLERRFAA SAR
|
|---|
| |