Gene Rleg_6842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6842 
Symbol 
ID8022425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp287753 
End bp288259 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID644833708 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002984842 
Protein GI241666758 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.173433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTCG CGAGCGCTGA GGCGCGCATC AAGGAACTGG CGATATGCCT CCCGAAGGCG 
CCCACGCCAT TCGGCGCGTA TGTCGAAGCG TTCCAAAGCG GCTCGCTGCT TTTCCTAAGC
GGCATGCTAC CGGTCGCCGG ACATTTGCCA CTCTATACGG GCCTCGTCGG CCGCGAGCTG
TCCGTCGCCG AAGGCTACGA CGCGGCGCGG GCGGCCTGCC TTAGTGGTCT AGCCGCCGCG
CAGTCGCAGC TAGGAACGCT GGACAGGATC CGATCGGTCT CCAAGCTGGG AGTCTACATC
GCCTGCCCCG CCGATTTCCA TGAACACCCC AAAGTCGCCG ATGGAGCGTC AGAGCTGTTG
CTCGATGTGT TCGGTCCCGC CCGGCTCCCT CCCCGTGTCG TCCTCGGCGT TTCCAGCATA
CCGCTTGGAA TGCCCGTCGA GGTCGAACTG GTCTTCGAGA TCGGGCCAGC ATTCGTCTCA
CAAACTCAAG AACGGAGCCA ACCATGA
 
Protein sequence
MVVASAEARI KELAICLPKA PTPFGAYVEA FQSGSLLFLS GMLPVAGHLP LYTGLVGREL 
SVAEGYDAAR AACLSGLAAA QSQLGTLDRI RSVSKLGVYI ACPADFHEHP KVADGASELL
LDVFGPARLP PRVVLGVSSI PLGMPVEVEL VFEIGPAFVS QTQERSQP