| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6665 |
|---|
| Symbol | |
|---|
| ID | 8022575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 94594 |
|---|
| End bp | 96429 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644833532 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002984666 |
|---|
| Protein GI | 241666582 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00669103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTG CCCAAACCCA ACCGATCCAG GCGACGACCG ACGTTCTTTC CGTCGAAGGT
CTGACGACAT CCTTCCTGGT GGACGGTGTC TGGAAACCGG TCGTGCGCGA TGTGTCTTTC
ACGGTGGTGC CAGCGGAGAC AGTGGCGATT GTCGGCGAAT CCGGCTCGGG CAAGAGCGTC
ACCTCGCTCT CGATCATGCG GCTGCTGCAG GCGGACACGA GCCGTGTCGA GGGCCGCGTC
ATGCTCGGCG GACGCGACCT TCTGGCCTTG CCGGAAAATG CCATGCGGCA GGTTCGCGGA
AACGAGGTGG CGATGATCTT CCAGGAGCCG ATGACATCGC TCAATCCGCT CTTCACCATC
GGCGACCAGA TTTCCGAAGC GCTGCTCTGC CATTCCGACA TGAGCAAAAC CGATGCGAAG
GCGGAGACGA TCCGGCTCTT GGAAAAGGTC CGCATCCCCT CGGCCGCCTC GCGCTTCGGC
GAATATCCGC ACCGTTTTTC CGGCGGCATG CGCCAGCGGG TGATGATCGC CATGGCGCTC
GCCAGCCGGC CGAAATTGCT GATCGCCGAC GAGCCGACGA CGGCGCTCGA CGTCACCATC
CAGGGCCAGA TCCTCGATCT CATCAAGATG CTGCAGGACG AGGAGGGGAC CTCCGTTCTG
TTCATCACCC ATGACATGGG TGTCGTCGCC GAGATCGCCG ACAGGACGGT GGTGATGTAT
CGCGGCGAAC AGGTGGAAAG CGGCGCCACC GCCGATATCT TCCACCGCGG CAAACATCCC
TATACCAGAG CGCTACTATC CGCCGTGCCG GTGCTCGGCT CGATGCAGGG CAGGCAAAGG
CCGCTGCGCT TTCCCGTGGT CAACACCGCA ACGGGTGAAT CCGACATTCC CGTCGAGGTC
ACCGATACGG TGGCAGCGAC GCCGGTCCTG CAGGTGAAGA ACCTCACCAA GCGTTTCGAT
ATTCATTCCG GTCTGTTCGG CCGGCTGACC AGCCGGGTGC ACGCAGTGGA AAACGTTTCC
TTCGACCTTC ATGCCGGCGA GACGCTGTCG CTCGTCGGCG AATCCGGCTG CGGCAAATCG
ACGACCGGCC GCGCCATCAT GCGGCTCATT GAGCCGCAGG CCGGTTCCGT TCTCGTCGAG
GGCAGGGAGG TGCTCGGCCT CGACAGGAAG GATCTGCGCG AGATGCGCAA ATCCGTGCAG
ATGATCTTCC AGGATCCCTT TGCCAGCCTC AATCCGCGCA TGACGGTCGG TGCTGCGATC
GCCGAACCCT ATCTCGAACA CAGGATGGGC AATTCGAAAC AGGCAAAAGA CGTCGTCGCC
GATCTGCTGG TGAAGGTCGG TCTGTCGGCG GATATGGCAG CGCGCTACCC GCATGAATTT
TCCGGCGGCC AGCGCCAGCG CATCTGCATT GCGCGCGCGC TTGCCTTGCA GCCGAAGGTC
ATCGTCGCCG ACGAAAGCGT CTCGGCGCTC GACGTCTCGA TCAAGGCGCA AGTCATCAAC
CTGATGCTCG ACCTGCAGCA GAGCCTCAAC CTTGCCTTCC TGTTCATCTC GCACGATATG
GCGGTAGTCG AGCGCGTCAG CCACCGGGTG GCGGTGATGT ATCTCGGCGA GATCGTCGAG
ATCGGCCCGC GGGCCGCGGT CTTCGAAAAT CCGCAGCATC CCTATACGAA GAAACTCATT
GCGGCAGTGC CCGTGCCGGA TCCGGACCGT CGCCACGAAA AGCGGATGGT GGCGAATGAC
GAGATCAAGA GCCCGATGCG CCCGGTCGAT TATCAGCCCG CGAGCACGTC TTATCGCGAA
GTCGGGCCGG GCCATCTGGT CATGGCCGAT CGGTAA
|
|---|
| Protein sequence | MASAQTQPIQ ATTDVLSVEG LTTSFLVDGV WKPVVRDVSF TVVPAETVAI VGESGSGKSV
TSLSIMRLLQ ADTSRVEGRV MLGGRDLLAL PENAMRQVRG NEVAMIFQEP MTSLNPLFTI
GDQISEALLC HSDMSKTDAK AETIRLLEKV RIPSAASRFG EYPHRFSGGM RQRVMIAMAL
ASRPKLLIAD EPTTALDVTI QGQILDLIKM LQDEEGTSVL FITHDMGVVA EIADRTVVMY
RGEQVESGAT ADIFHRGKHP YTRALLSAVP VLGSMQGRQR PLRFPVVNTA TGESDIPVEV
TDTVAATPVL QVKNLTKRFD IHSGLFGRLT SRVHAVENVS FDLHAGETLS LVGESGCGKS
TTGRAIMRLI EPQAGSVLVE GREVLGLDRK DLREMRKSVQ MIFQDPFASL NPRMTVGAAI
AEPYLEHRMG NSKQAKDVVA DLLVKVGLSA DMAARYPHEF SGGQRQRICI ARALALQPKV
IVADESVSAL DVSIKAQVIN LMLDLQQSLN LAFLFISHDM AVVERVSHRV AVMYLGEIVE
IGPRAAVFEN PQHPYTKKLI AAVPVPDPDR RHEKRMVAND EIKSPMRPVD YQPASTSYRE
VGPGHLVMAD R
|
|---|
| |