Gene Rleg_6603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6603 
Symbol 
ID8022853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp29055 
End bp29891 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID644833472 
Product5-keto-4-deoxyuronate isomerase 
Protein accessionYP_002984606 
Protein GI241666522 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3717] 5-keto 4-deoxyuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00127323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATCG ACGTGAGGCA CGCCTCCCAT CCAGAGGCCG TGCGTGATTT CGACACGGAG 
ACGCTGAGGC GTCACTTTCT GGTGGAAACC GTCTTCGCGA GCGGCGAGAT CCGGCTCACC
TATTCGCATT ACGACCGGAT GGTCATCGGC GGCGCGACGC CGATCGGCCC CGGGCTGACG
CTGACGGCGC CGACAGCGAT CGGACAGGAA ACCTTCCTTG CCGAACGTGA ACTGGGCGCT
CTGAACATCG GCGGTGCCGG CCGCATCATC GTCGACGGCA CGAATTACGA TCTTGCCAAA
TATGATTGCC TCTATGTCGG CAAGGGTTCC AAGGACATCA GATTCGAGAG CACGGATACC
GCCAATCCGG CAAAGTTCTA TCTGGTCTCG ACACCAGCCC ATCAAACGCA CCCGACCGTG
TTGCTCACCC GCGAAAAGGC CCGTCACCTG ACGCCGGGCG AAGCCGCGAC GGCCAACAAG
CGGTCGATCT ACCAGTTCAT CCATCCTGAG GTCTGCCAGT CCTGCCAACT CACTCTGGGC
TTCACCATGA TCGAGCCGGG CAGCGTCTGG AACACAATGC CAGCCCACAC GCATGACCGC
CGCATGGAAG CCTATCTCTA TTTCGATCTC GAAGCAGAGC AGCGCGTCTT CCACTTCATG
GGCGAGCCGC AGCAGACCCG GCATATGCTT GTCGCCAACG AACAGGCGGT CATCTCGCCG
CCCTGGTCGA TCCATTCGGG CGCCGGCACC AAGAATTACA GCTTCATCTG GGCGATGGCC
GGCGACAATA AGAGCTTCAC CGACATGGAC CATATCGCCA TTGCGGATCT GAGGTGA
 
Protein sequence
MQIDVRHASH PEAVRDFDTE TLRRHFLVET VFASGEIRLT YSHYDRMVIG GATPIGPGLT 
LTAPTAIGQE TFLAERELGA LNIGGAGRII VDGTNYDLAK YDCLYVGKGS KDIRFESTDT
ANPAKFYLVS TPAHQTHPTV LLTREKARHL TPGEAATANK RSIYQFIHPE VCQSCQLTLG
FTMIEPGSVW NTMPAHTHDR RMEAYLYFDL EAEQRVFHFM GEPQQTRHML VANEQAVISP
PWSIHSGAGT KNYSFIWAMA GDNKSFTDMD HIAIADLR