| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6580 |
|---|
| Symbol | |
|---|
| ID | 8022830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 6446 |
|---|
| End bp | 7579 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644833449 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_002984583 |
|---|
| Protein GI | 241666499 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.852509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0314164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAT CATGGCGTTT CTCCGTCTTG GCGGATCGGC ATCGCGCACT GGGATCGAAG
CTCGAGGACT GGAGCGGTAT GGGCACCGCC TGGACCTATG ACAAAGACAT GTCGGAAGAG
CATGTCGCCG TCCGTACCAA GGCCGGCATC ATGGATGTTT CGGGCCTGAA GAAGGTGCAT
CTGGTCGGCC CGCACGCCAT CGCCGTGCTC GACTCCATCA CCAGCCGCGA CCTGACGAAG
ATCTACCCCG GCCGGTCAGT CTATGCGACG ATGCTGAACG AGCGCGGCCA CTTCACCGAC
GACTGCATCG TCTATCGCAC CGGCCCGAAT TCCTGGATGC TGGTGCATGG CTCCGGCTCC
GGCCACGAGG AACTCGTCAA GCAGGCCGCG GGCCGCAATT GCGCCGTGCT CTTCGATGAC
GACCTGCACG ACCTGTCGCT GCAGGGACCG CTCGCGGTCG ACTATCTGGC CAAATATGTG
CCCGGCATTC GCGATCTCAA ATACTTCCAC CACATGCAGA CGACGCTGTT CGGCGCGCCG
GTGATGATCT CGCGCACCGG TTATACCGGC GAGCGCGGCT ACGAGATCTT CGTGCGCGGC
CAGGACGCCG TCATGGTCTG GGACCGGATC GTCGAGGAAG GCAAGGAGAT GGGCATCATC
CCCTGCTGCT TCTCCGTTCT CGACATGCTG CGGGTCGAAA GCTACCTGCT CTTCTACCCT
TACGACAATT CGCAAATGTA TCCCTTCGCC GATCAGCCGC CCGGCGATAG CCTCTGGGAA
CTCGGCCTCG ACTTCACCGT CAGCCCCGGC AAGACGGGCT TCCGTGGCGC CGAGGAGCAT
GCCCGCCTCA AGGGCAAGGA ACGCTTCAAG ATCTTCGGCA TGCTGATCGA TGCCGACGGA
CCGGCCGATC TCGGTGACGA AGTCTTTGCC GACGGCAAAA AGGTCGGTGT CATTACCTGC
CCGAGCTATT CCTCCCTGAC GAAGAAATCC ATGGCGATTG CCCGCTTGGA CGTTGACAAG
GCGGTGCATG GGACGAAACT CGAAGTCCGC GGCAAGACAG TAAAGGCAAG CGCCACCGCC
CACACGCTTC CCTTCGACGA TCCGGAGAAG AAAAAGAGGA TTGCCGTAGG TTAA
|
|---|
| Protein sequence | MALSWRFSVL ADRHRALGSK LEDWSGMGTA WTYDKDMSEE HVAVRTKAGI MDVSGLKKVH
LVGPHAIAVL DSITSRDLTK IYPGRSVYAT MLNERGHFTD DCIVYRTGPN SWMLVHGSGS
GHEELVKQAA GRNCAVLFDD DLHDLSLQGP LAVDYLAKYV PGIRDLKYFH HMQTTLFGAP
VMISRTGYTG ERGYEIFVRG QDAVMVWDRI VEEGKEMGII PCCFSVLDML RVESYLLFYP
YDNSQMYPFA DQPPGDSLWE LGLDFTVSPG KTGFRGAEEH ARLKGKERFK IFGMLIDADG
PADLGDEVFA DGKKVGVITC PSYSSLTKKS MAIARLDVDK AVHGTKLEVR GKTVKASATA
HTLPFDDPEK KKRIAVG
|
|---|
| |