Gene Rleg_6456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6456 
Symbol 
ID8017124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp174157 
End bp175284 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID644828251 
Productinner-membrane translocator 
Protein accessionYP_002979451 
Protein GI241554238 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.425632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0359026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AGGCCAATGA TCCCGCAATA GCCATCACGG AAAAACCGGT GTCGCTGCGC 
CCCATCTTCG AATGGATCGC GCGGCGAGCC GAGCCTGTTG TCATCGGCCT CGCGGCCATC
CTGATCGGTC TTGCGCTCTT CTCCCTCTTC ATCCTGGCGG TCGGCAAGTC GCCGGCCACC
CTCTTCCAAC TGATATATAC CGGCGGTTTC GGCAGCTGGT TTTCGGTGCA GAACAGCTTA
AGTCGTGCCG CACCCCTTCT CCTGACGGCA CTCTGCGTCG CCCTGCCCGC CCGTCTCGGC
CTCGTCATCA TCGGCGGGGA AGGAGCGGTC GTGCTGGGCG GCGTTGCCGC CGCAGCCATG
GCTCTGCCGC TCGCCGGCAC CGCGCCTGTT TTCCTCACTC TCATTCTGAT GGCAATCGCT
GCCATGGTGG TCGGCGGCAT CTGGATCGGC CTTGCCGGTT TCCTGCGGCA CTATCGCGGC
GTCAATGAAA CCATTTCGTC GCTGCTGCTC TCCTATATCG CCATCGCCCT GATGAACCAG
TTTGTCGAAG GGGTGCTGCG CGATCCTGCA AGCCTCAACA AGCCGTCGAC CAGGCCGCTG
CCGGCGGACT ACATGCTCGG CAACATTCCC GGCATGGACG TGCATTGGGG CCTCGTCATC
GGCATCCTCG CCTGCATGAT CTCCTGGATC GTGATCGAGG CGACGAGCTA TGGTTTTGCC
GCCCGCATCG CCGGCGGCAA CGTGCGCGCC GCGCAGATCC AGGGGCTGCC GGTGGGCAAG
CTGATTGCCG GATTTACCGC GCTTGCCGGC AGCTTTGCCG GTCTGGCGGG CATGATCGAA
GTGGCGGCGG TGCAGGGAAG TGCCAACGCC TCGCTTGCCG CCGGCTACGG TTATACCGGT
ATCCTCGTCG CCTTCCTCGC CAGGCACAAT CCGCTGGCGA TCATTCCGGT CGCGATCCTG
CTCGGTGGCA TCGACGCCTC GGGCGGCCTC ATCCAGCGGC GCATGGGCCT GCCGGATGCT
ACGGTTCTGG TGCTGCAGGG GACGCTCTTC ATCGTCATTC TCTTCTGCGA GACCTTCTAC
GGCCGCTTCA AGATCTTCAA TCCCGACCTC TGGAAAAGGA GCCTCTGA
 
Protein sequence
MTIEANDPAI AITEKPVSLR PIFEWIARRA EPVVIGLAAI LIGLALFSLF ILAVGKSPAT 
LFQLIYTGGF GSWFSVQNSL SRAAPLLLTA LCVALPARLG LVIIGGEGAV VLGGVAAAAM
ALPLAGTAPV FLTLILMAIA AMVVGGIWIG LAGFLRHYRG VNETISSLLL SYIAIALMNQ
FVEGVLRDPA SLNKPSTRPL PADYMLGNIP GMDVHWGLVI GILACMISWI VIEATSYGFA
ARIAGGNVRA AQIQGLPVGK LIAGFTALAG SFAGLAGMIE VAAVQGSANA SLAAGYGYTG
ILVAFLARHN PLAIIPVAIL LGGIDASGGL IQRRMGLPDA TVLVLQGTLF IVILFCETFY
GRFKIFNPDL WKRSL