Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6437 |
Symbol | |
ID | 8016936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 155373 |
End bp | 157739 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644828232 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002979432 |
Protein GI | 241554219 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00543236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGATCG TTCTTCCTTC CAGCTCCAAT ACGTTTCAGC AATCCTGGAT CGCCTCCGGG AGAATTCTGT TCCTTATTGC CGTCAGCGGG CTCGGAGCGA TCGGGCTTGT CGTACTCTCG GCGCTCTGGG CAGGAACCGA AAGCGATGCC GCAGCCCTCG ATCGACAGCG TCAGCTTGTG AATGCCCGCC TGCGCGAACA GGTCGATCAA GTCGCGCATG TTATCGGCCA GTTCGGCAAT GGCTATCTCG CACGTGTCTA TCCTGCCGCC CTTTCGACCG AAGGCTCCTC CGGCCTCGAT GCCGTTTTGA CGGCAGCAGC CGGGAGTGCG ATCGGCCAGA CGGCTATGTC GGCGTTCGGC TACGACCAGG CCTTTGTTGT CGATGAAAAG GCGCAACTGC TCATGCTGGC GGACGCCCAA ACGGAGAAGC GGTACCGCTG GATGAGGCCT CTCTTTTTGC CTCTCCTTCA GGATGCCCGC TTTGGGGTCA GGCGAAGCAC GGCTTTGAAC GAAAGAACGC CATCCTCAAT GGAAGCCCGC CTTGCGAGCG CCGCCCATTC CAACCGTGCT CTGGCCAATC TGATGCGGCT CGAGGGCCGG CCGACCATCG TCGGAGTCGT CGCCATTAAC GAGGCTGCCG GGGGACAGCG CCAGCCGATG CGGCAATTCC TGATCGTCGT GCGCTTTATC GATGGTGCGG CGCTGGACGA ATTGAGCCGG CAACAGGGCC TTAACGGCGC CCGCTTCGCG CGCACCGCCG ATGCGGACGA AAATGAGGTT GCGTTCCAGA TTGACGCCAC GGCAAACGGC GAACCGATCG GCTTTATCGT ATGGCGGCCG GATCTTCCAG GTTCGAGGGT GATCGGTCGA TTGATGCCGG CGCTTTCGAT TGCCGCCTTG GTGATCGCGA TCCTGTTCTC GGTCTTGCTG GTGCGCCTGC GAAGGAGTCT CGGCGAGTTG AAGAAAAGCG AGCTGCATGC AAGGCAGCTT GCCTTGCATG ATGTGCTCAC CGATCTTCCC AACCGCGCTT TGTTCGCTAT GAGGTTCGAC GAGTGCCTGG CCGAGACGCA GAATTCGACC GAGCGCTCGG CGGTCGCACT TCTCGACCTC GATCGCTTCA AAGCGGTGAA CGACACATTC GGCCATGCCG CCGGCGATGA ACTCATCAGG ATGGCCGCCG AGCGGATCCG CTCGCTGCTT CGTCCGGGCG ACACGCTTGC CCGGCTAGGG GGCGACGAAT TTGCGCTGCT TCTCCGGGAC ATCAAAGATC ATGACCACGT TTTGCCGGCA ATATGCGAAG CGATCGTTGC CGAACTTGGC AAACCCTTCC CGCTTTTGCG CGGCGAAGCG GTTGCGCGCG TCGGCGGCTC GATCGGCGTG ACCGTCGTGC CGGATGCCGG GCGGAATGCC GATGACATCA TGCGCTACGC CGACGTCGCG CTGTACGAGG CAAAGATGGG CGGCCGAGGC CAGTGGCGTC TCTATTCACC GTCCATGGAC GGCGGCCGAA ATGCACGCGA CATTCTCAAG AACGAATTGC GGGAAGTTCT GGCCAAAGGC ATGGCCTCAG ATGGTCCACA CGCCGATCCG GTTTCGAACC GGCCGGACTT CGGATCGCTC GAGGTCTATT ACCAAACGGT CCATCGCGCT GAGGCAGGAT ACGCGGCGTC GGGCGCGGAA GCTCTCGTGC GTTGGCGTCA CAGTCAGCGC GGGCTGTTGA CGCCTGCCAG CTTCATCCCT GTCGCCGAGG AGGGCGGCCT CATCGACGCT CTCGGTTTCT GGGTCTTGCG CGAAGCCTGC AGAGCCGCCT GCAAATGGCC GGAGGACACG TTTGTTGCGG TCAACGTGTC TCCTGCCCAG TTGAGAAGAC CGAATTTCGC CGAGGAAGTT TTCGCCGTGC TTGAGGAGAG CGGTCTGCAG CCGTCCCGGC TCGAGCTCGA ACTCACCGAG TCCTCACTGA TCGAGGACAA CTCGGACGTT TATACGGTGC TGAAGTCGTT GCGCAGCCGG GGTGTCCAGG TTTCGCTGGA TGATTTCGGA ACTGGCTTTT CATGCCTCAG CCATCTCCTG CGCTTCGATA TCGACCGCAT CAAGATCGAT CGATCGTTCG TCTCACAGCT CGGCACCAAG GCCAATGGGG CGGCAATCAT TGGCGCCATC GTCGCGCTCA GCCGTAACCT CGGTATCTCG ACGACGGCCG AAGGGGTCGA AACCGATTAT CAACGCGACT TTCTGGCCGC CCTCGGCTGC ACCGACCTCC AAGGCTACTT CTTCTCCAAA CCCGTTCCTA TTGGCGAGCT TGATAGTTTC CGGAAAGCTG AAAGCGCCGC TGGGTTACTG ACGACCGCCC GAGGCGCCGT CGCGTGA
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Protein sequence | MQIVLPSSSN TFQQSWIASG RILFLIAVSG LGAIGLVVLS ALWAGTESDA AALDRQRQLV NARLREQVDQ VAHVIGQFGN GYLARVYPAA LSTEGSSGLD AVLTAAAGSA IGQTAMSAFG YDQAFVVDEK AQLLMLADAQ TEKRYRWMRP LFLPLLQDAR FGVRRSTALN ERTPSSMEAR LASAAHSNRA LANLMRLEGR PTIVGVVAIN EAAGGQRQPM RQFLIVVRFI DGAALDELSR QQGLNGARFA RTADADENEV AFQIDATANG EPIGFIVWRP DLPGSRVIGR LMPALSIAAL VIAILFSVLL VRLRRSLGEL KKSELHARQL ALHDVLTDLP NRALFAMRFD ECLAETQNST ERSAVALLDL DRFKAVNDTF GHAAGDELIR MAAERIRSLL RPGDTLARLG GDEFALLLRD IKDHDHVLPA ICEAIVAELG KPFPLLRGEA VARVGGSIGV TVVPDAGRNA DDIMRYADVA LYEAKMGGRG QWRLYSPSMD GGRNARDILK NELREVLAKG MASDGPHADP VSNRPDFGSL EVYYQTVHRA EAGYAASGAE ALVRWRHSQR GLLTPASFIP VAEEGGLIDA LGFWVLREAC RAACKWPEDT FVAVNVSPAQ LRRPNFAEEV FAVLEESGLQ PSRLELELTE SSLIEDNSDV YTVLKSLRSR GVQVSLDDFG TGFSCLSHLL RFDIDRIKID RSFVSQLGTK ANGAAIIGAI VALSRNLGIS TTAEGVETDY QRDFLAALGC TDLQGYFFSK PVPIGELDSF RKAESAAGLL TTARGAVA
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