Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6424 |
Symbol | |
ID | 8016923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 139569 |
End bp | 140396 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644828219 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002979419 |
Protein GI | 241554206 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.288867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.037184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGC GAGATATCCC CATCACCGCC TGGATCGGCA TGGCCGGTAT CGCCATCGCT TTCATCTTCG CGCTCTTCGC TCCCTGGCTC GCCCCCTATG GCGAGACGCA GGTCGTCGGC GACGTGTGGC AGTTGCCTGA TAACCAGTAT ATTTTCGGTC TCGACAATCT CGGCCGCGAC ATCTTCTCGC GGTTGATCTA CGGCGCGCGC ACGACGCTGA CGGTCGCATC CGCCGCCACC GTCATCTCCT TCTCGCTGGG CATTATCCTG AGCTTCACCG CGGCCGTCTC GCGCGGCATC ATCGACACGG TCTTTTCGCG CTTCAACGAT CTGATGATGT CGATCCCGAC GCTGATCTTC GCGCTCGTCG TTCTTGCGGT GCTGCCGCAA AACATCGTCG TGTTGATCCT TGTCATGGCG ATCCTCGATT CCACCCGCGT CTATCGTCTC GGCCGCGCCG TCGCGCTCGA TGTCGCGGTG ATGGAATTCG TCGAGGCGGC AACACTGCGC GGCGAAGGCA AACTTTGGAT CATCTTCCGC GAAATCCTGC CGAACACGCT GTCGCCGCTG CTGGCCGAAT TCGGCCTGCG CTTCGCCTTC TCGATCCTGT TCCTCTCGAC GCTTTCCTTC CTCGGCCTCG GCATTCAGCC GCCTGCGGCC GATTGGGGCG GCATGGTCAA GGACAACAAG GACGGCATCA TCTTCGGTAT CTCGGCAGCG CTGGTGCCGG GCACGGCGAT CGCGACACTT GCCGTCTGCG TCAACCTCGT GGTCGACTGG CTCCTGAAAC GCACATCCAG CCTCAAGGGA GGGCGCGGCG ATGCCTGA
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Protein sequence | MRLRDIPITA WIGMAGIAIA FIFALFAPWL APYGETQVVG DVWQLPDNQY IFGLDNLGRD IFSRLIYGAR TTLTVASAAT VISFSLGIIL SFTAAVSRGI IDTVFSRFND LMMSIPTLIF ALVVLAVLPQ NIVVLILVMA ILDSTRVYRL GRAVALDVAV MEFVEAATLR GEGKLWIIFR EILPNTLSPL LAEFGLRFAF SILFLSTLSF LGLGIQPPAA DWGGMVKDNK DGIIFGISAA LVPGTAIATL AVCVNLVVDW LLKRTSSLKG GRGDA
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