Gene Rleg_6406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6406 
Symbol 
ID8016905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp118881 
End bp119771 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID644828201 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979401 
Protein GI241554188 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.131227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.392308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA CTTGGGATGC AGATGAGGCG AAACAGTCGC GGTCGTCCGG CGGTAGAATT 
GTGCGGGCAG GTTCTGGCCT GGTAAAACCG GCTGGCTCCA CGGGCCCCCG AGCCAGGCGC
AGGTTAGGCC CCGGACCGGC GATCCCTTTC GGACTGCAGA TCGGGCCGGC ATTACTCGTC
TTGACCTGGG TCGTCGGCTC GGCGCTCGGA TGGATCGACC CGCGTATCCT GTCGGCGCCG
TGGACGGTGG CCGAGGCTTT CGTAAGGCTC ATTGAGCAGG GTCGCCTGCA GGATAACTTC
GTGACGTCGG CGACACGCGC CCTGCTCGGC CTTAGCATCG GTTTGCTGAT CGGCACGATC
CTGGCGTTGA TCGCCGGCCT TTCCCGGATC GGCGAAGCCC TGATCGACGG GCCGGTGCAG
ATCAAGCGCG CGATACCGAC GCTGGCCCTG ATCCCCTTGC TGATCCTGTG GTTCGGCATC
GGCGAGAGCA TGAAGGTTAC AACCATAGCG CTTGCCGTGA TCGTGCCGAT TTATATCCAC
ACCCACAATG CGCTCCGCAG CATCGACAGC CGTTACGTCG AACTGGCCGA AACCCTGCGC
ATGAGCCAGA AGGACTTCAT TCTTCAGGTG GTGCTGCCGG GTGCTTTGCC GGGTTTCCTT
CTGGGTCTGC GGTTTGCCGT CACCCTCTGC TGGGTTTCTC TCGTCGTGGT CGAGCAGATC
AACGCCACCA GCGGGCTCGG TTACATGATC GATCTTGCCC GCAATTACGG GCAGACCGAC
GTCATTCTCG TCGGCCTGGT GGTCTATGTA CTGCTCGGTC TCGTCTCGGA CGGTCTCGTC
CGCCTGCTTG AACGGAGGGC CCTCTCATGG CGCCGCACCC TGGCAAACTG A
 
Protein sequence
MATTWDADEA KQSRSSGGRI VRAGSGLVKP AGSTGPRARR RLGPGPAIPF GLQIGPALLV 
LTWVVGSALG WIDPRILSAP WTVAEAFVRL IEQGRLQDNF VTSATRALLG LSIGLLIGTI
LALIAGLSRI GEALIDGPVQ IKRAIPTLAL IPLLILWFGI GESMKVTTIA LAVIVPIYIH
THNALRSIDS RYVELAETLR MSQKDFILQV VLPGALPGFL LGLRFAVTLC WVSLVVVEQI
NATSGLGYMI DLARNYGQTD VILVGLVVYV LLGLVSDGLV RLLERRALSW RRTLAN