Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6370 |
Symbol | |
ID | 8016984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 82040 |
End bp | 82819 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828165 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002979365 |
Protein GI | 241554152 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.719831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.512814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTCT CCGACTACAA GACCGCACTG GTGACCGGCG CATCCTCCGG TATCGGCGCA GCCGTGGTTG AGCGGTTCCG CCGGGAGAAC ATCGAGGTCC ATGCCGTTGC CCGCAGTGCC GAAGCGCTGC AGCAGCTGGC CGCGCGGACG GGCTGCCTCG CCCACGTCAT CGACGTCACC GACCGTCAGG CCATGGCAGA GCTCACACGT CGGGTGGAGT TCGATATTCT CGTCAACAAT GCCGGTGTCG ACCGGCCGAA GAAATTCCTG GAAGCCGACG AGGGCGATAT CGATCTCATC GTCGACGTCA ATCTCCGGGC GGTTCTGCAC ATCTGCCGGC TGGTCGTGCC CGGTATGGTG GCGCGCGACC GCGGACATGT CATCAACATC TCGTCGATCG CCGGCGCCTA TAATTTCGGC GGCAACTCAT CCTATCACGC CACCAAGGCA GGGGTGAGCA TGCTGTCCAA CCAGCTGCGC ATCGACGCTT TCGGCAAGCG GGTACGGGTC ACGGAAATCT GCCCCGGCCG GGTCGCCACT GACATCTTCA ATCACGTCCA CGGCGATGAC CCCAGCATCC GCGAACGGTT CATCGACGGC TTCGAACTGC CGCAGGCGAC CGATATCGCC GACGCGATTG CCTTCGCCAT AGCAGCCCCC GTCGCCGTCA ACATCGGACA TATGGAAATC ACACCGACGC TGCAGGTCAT GGGCGGCCTG CAGACGGCAA AGCCCCAACC TGCGGCGAAG CTGGATCAAT CCGGGGAGCC AAACCCGTGA
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Protein sequence | MPFSDYKTAL VTGASSGIGA AVVERFRREN IEVHAVARSA EALQQLAART GCLAHVIDVT DRQAMAELTR RVEFDILVNN AGVDRPKKFL EADEGDIDLI VDVNLRAVLH ICRLVVPGMV ARDRGHVINI SSIAGAYNFG GNSSYHATKA GVSMLSNQLR IDAFGKRVRV TEICPGRVAT DIFNHVHGDD PSIRERFIDG FELPQATDIA DAIAFAIAAP VAVNIGHMEI TPTLQVMGGL QTAKPQPAAK LDQSGEPNP
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