Gene Rleg_6370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6370 
Symbol 
ID8016984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp82040 
End bp82819 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID644828165 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002979365 
Protein GI241554152 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.719831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.512814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCT CCGACTACAA GACCGCACTG GTGACCGGCG CATCCTCCGG TATCGGCGCA 
GCCGTGGTTG AGCGGTTCCG CCGGGAGAAC ATCGAGGTCC ATGCCGTTGC CCGCAGTGCC
GAAGCGCTGC AGCAGCTGGC CGCGCGGACG GGCTGCCTCG CCCACGTCAT CGACGTCACC
GACCGTCAGG CCATGGCAGA GCTCACACGT CGGGTGGAGT TCGATATTCT CGTCAACAAT
GCCGGTGTCG ACCGGCCGAA GAAATTCCTG GAAGCCGACG AGGGCGATAT CGATCTCATC
GTCGACGTCA ATCTCCGGGC GGTTCTGCAC ATCTGCCGGC TGGTCGTGCC CGGTATGGTG
GCGCGCGACC GCGGACATGT CATCAACATC TCGTCGATCG CCGGCGCCTA TAATTTCGGC
GGCAACTCAT CCTATCACGC CACCAAGGCA GGGGTGAGCA TGCTGTCCAA CCAGCTGCGC
ATCGACGCTT TCGGCAAGCG GGTACGGGTC ACGGAAATCT GCCCCGGCCG GGTCGCCACT
GACATCTTCA ATCACGTCCA CGGCGATGAC CCCAGCATCC GCGAACGGTT CATCGACGGC
TTCGAACTGC CGCAGGCGAC CGATATCGCC GACGCGATTG CCTTCGCCAT AGCAGCCCCC
GTCGCCGTCA ACATCGGACA TATGGAAATC ACACCGACGC TGCAGGTCAT GGGCGGCCTG
CAGACGGCAA AGCCCCAACC TGCGGCGAAG CTGGATCAAT CCGGGGAGCC AAACCCGTGA
 
Protein sequence
MPFSDYKTAL VTGASSGIGA AVVERFRREN IEVHAVARSA EALQQLAART GCLAHVIDVT 
DRQAMAELTR RVEFDILVNN AGVDRPKKFL EADEGDIDLI VDVNLRAVLH ICRLVVPGMV
ARDRGHVINI SSIAGAYNFG GNSSYHATKA GVSMLSNQLR IDAFGKRVRV TEICPGRVAT
DIFNHVHGDD PSIRERFIDG FELPQATDIA DAIAFAIAAP VAVNIGHMEI TPTLQVMGGL
QTAKPQPAAK LDQSGEPNP