Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6323 |
Symbol | |
ID | 8017190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 39654 |
End bp | 40913 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644828118 |
Product | inner-membrane translocator |
Protein accession | YP_002979318 |
Protein GI | 241554105 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4214] ABC-type xylose transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.47689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA CCATCCAGAA TGAGCCGGCG GCACCTGCGC TTCTTGACCG AAGTGACGAA AGAGTGCGCC ATGACGATAG CCTTACCGGC TCGATCCGCG CCTTTGGGGA TCGCATCCGC TCAGGCGATC TCGGTTCGCT GCCGGTCATT GTCGGCCTGG CGATCATCTG GACGGTGTTC CAGGCGCTCA ATCCGGTGTT TCTCTCGAGC AGCAACCTCG TCAACATGCT GTTCGACTGC TCGACGGTCG GTGTCATCTC ACTCGGCATC GTCTGCATCC TGATGGTGGG TGAGATCGAC CTTTCCGTCG GCTCCGTCAG CGGCTTCGCC TCGGCACTGG TCGGCGTCTT CTGGGTCAAC CAGGGCTGGC CGGTGGTTCT CGCGGTCCTC GCCGCCATGA TCGTCGGCGT CCTGATCGGC TCGCTCTACG CATTTCTCTT CAACCGCTTC GGCATGCCGA GCTTCGTGTC GACGCTGTCC GGGCTGCTCG CGGTTCTCGG CCTGCAGCTC TATATCCTCG GAGCGACCGG TTCGATCAAT CTTCCCTATG GTTCCTGGCT CGTGAGTTTC GGTCAGATCA TGGTCATGCC GGACCCGATC GCCTATCTGC TGGTGGCACT TGCCGGCATT GCCTTCTTCT TCGCTAGCTA CCGCACCTCG GCGCGCCGGC GGGCGGCCGG CCTGTCAGCG AAATCGGCCC GGGGGCTGCT TCTACGCGCC GTCATCATCA CACTCGCCCT GGAAGCTGTC GCGTTCTATC TTAACCAGTC GCGCGGCATT CCGTGGATGT TCGGCCTTTT CGTCGGGCTC ACCAGCGCGA TGAATTATGC GCTGACGCGC ACCAAATGGG GACGCTCGAT GCATGCCGTC GGCGGCAACA GGGAGGCCGC CCGTCGTTCC GGCATCAACG TCTCGCGCAT CTATACGAGC GCTTTCGTCA TGTGCGCTCT GCTTGCGGCA ACCGGCGGCG TTCTCTCCGC CGCACGGCTG GCGACGGCAA GTCAGCAAGC CGGCACCGGC GACGTCAATC TCAATGCCAT CGCCGCAGCA GTTATCGGCG GCACGAGCCT GTTTGGCGGG CGAGGCAGTG CCTATTCAGC CCTTCTCGGC ATCATCGTCA TTCAGTCGAT TGCCAGCGGG CTGACGCTTC TCGATCTGTC ATCGTCACTT CGATACATGA TCACCGGCGC TGTCCTTGCC GTCGCCGTCA TCGTCGACTC GCTGGCACGC CGCTCGCGAA TTTCGCACGG CCGAGCCTAA
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Protein sequence | MMKTIQNEPA APALLDRSDE RVRHDDSLTG SIRAFGDRIR SGDLGSLPVI VGLAIIWTVF QALNPVFLSS SNLVNMLFDC STVGVISLGI VCILMVGEID LSVGSVSGFA SALVGVFWVN QGWPVVLAVL AAMIVGVLIG SLYAFLFNRF GMPSFVSTLS GLLAVLGLQL YILGATGSIN LPYGSWLVSF GQIMVMPDPI AYLLVALAGI AFFFASYRTS ARRRAAGLSA KSARGLLLRA VIITLALEAV AFYLNQSRGI PWMFGLFVGL TSAMNYALTR TKWGRSMHAV GGNREAARRS GINVSRIYTS AFVMCALLAA TGGVLSAARL ATASQQAGTG DVNLNAIAAA VIGGTSLFGG RGSAYSALLG IIVIQSIASG LTLLDLSSSL RYMITGAVLA VAVIVDSLAR RSRISHGRA
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