Gene Rleg_6323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6323 
Symbol 
ID8017190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp39654 
End bp40913 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID644828118 
Productinner-membrane translocator 
Protein accessionYP_002979318 
Protein GI241554105 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4214] ABC-type xylose transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.47689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA CCATCCAGAA TGAGCCGGCG GCACCTGCGC TTCTTGACCG AAGTGACGAA 
AGAGTGCGCC ATGACGATAG CCTTACCGGC TCGATCCGCG CCTTTGGGGA TCGCATCCGC
TCAGGCGATC TCGGTTCGCT GCCGGTCATT GTCGGCCTGG CGATCATCTG GACGGTGTTC
CAGGCGCTCA ATCCGGTGTT TCTCTCGAGC AGCAACCTCG TCAACATGCT GTTCGACTGC
TCGACGGTCG GTGTCATCTC ACTCGGCATC GTCTGCATCC TGATGGTGGG TGAGATCGAC
CTTTCCGTCG GCTCCGTCAG CGGCTTCGCC TCGGCACTGG TCGGCGTCTT CTGGGTCAAC
CAGGGCTGGC CGGTGGTTCT CGCGGTCCTC GCCGCCATGA TCGTCGGCGT CCTGATCGGC
TCGCTCTACG CATTTCTCTT CAACCGCTTC GGCATGCCGA GCTTCGTGTC GACGCTGTCC
GGGCTGCTCG CGGTTCTCGG CCTGCAGCTC TATATCCTCG GAGCGACCGG TTCGATCAAT
CTTCCCTATG GTTCCTGGCT CGTGAGTTTC GGTCAGATCA TGGTCATGCC GGACCCGATC
GCCTATCTGC TGGTGGCACT TGCCGGCATT GCCTTCTTCT TCGCTAGCTA CCGCACCTCG
GCGCGCCGGC GGGCGGCCGG CCTGTCAGCG AAATCGGCCC GGGGGCTGCT TCTACGCGCC
GTCATCATCA CACTCGCCCT GGAAGCTGTC GCGTTCTATC TTAACCAGTC GCGCGGCATT
CCGTGGATGT TCGGCCTTTT CGTCGGGCTC ACCAGCGCGA TGAATTATGC GCTGACGCGC
ACCAAATGGG GACGCTCGAT GCATGCCGTC GGCGGCAACA GGGAGGCCGC CCGTCGTTCC
GGCATCAACG TCTCGCGCAT CTATACGAGC GCTTTCGTCA TGTGCGCTCT GCTTGCGGCA
ACCGGCGGCG TTCTCTCCGC CGCACGGCTG GCGACGGCAA GTCAGCAAGC CGGCACCGGC
GACGTCAATC TCAATGCCAT CGCCGCAGCA GTTATCGGCG GCACGAGCCT GTTTGGCGGG
CGAGGCAGTG CCTATTCAGC CCTTCTCGGC ATCATCGTCA TTCAGTCGAT TGCCAGCGGG
CTGACGCTTC TCGATCTGTC ATCGTCACTT CGATACATGA TCACCGGCGC TGTCCTTGCC
GTCGCCGTCA TCGTCGACTC GCTGGCACGC CGCTCGCGAA TTTCGCACGG CCGAGCCTAA
 
Protein sequence
MMKTIQNEPA APALLDRSDE RVRHDDSLTG SIRAFGDRIR SGDLGSLPVI VGLAIIWTVF 
QALNPVFLSS SNLVNMLFDC STVGVISLGI VCILMVGEID LSVGSVSGFA SALVGVFWVN
QGWPVVLAVL AAMIVGVLIG SLYAFLFNRF GMPSFVSTLS GLLAVLGLQL YILGATGSIN
LPYGSWLVSF GQIMVMPDPI AYLLVALAGI AFFFASYRTS ARRRAAGLSA KSARGLLLRA
VIITLALEAV AFYLNQSRGI PWMFGLFVGL TSAMNYALTR TKWGRSMHAV GGNREAARRS
GINVSRIYTS AFVMCALLAA TGGVLSAARL ATASQQAGTG DVNLNAIAAA VIGGTSLFGG
RGSAYSALLG IIVIQSIASG LTLLDLSSSL RYMITGAVLA VAVIVDSLAR RSRISHGRA