Gene Rleg_6100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6100 
Symbol 
ID8016057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp137929 
End bp138939 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content61% 
IMG OID644827406 
Productoxidoreductase domain protein 
Protein accessionYP_002978606 
Protein GI241258722 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.207397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.764338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAT TTGCCGTCGT CGGAATCGAC CATGGGCACA CGTTCGATCA CGTAAAGGGG 
TTGCTGGCCG CAGGCGGCGA GTTCGTCGGC TATTGCCCGC AGACCTCGGT GCCGGCGTTG
CGCGAGGGCT TCGAGAAGAC CTATCCTGAC GCGCCGCAGA TCGACAGGCA AAAGCTGTTC
GACGATCCGT CGATCGACGT CATCTGCATC TCGGCGATCC CGCGCGATCG TGCCGGGCTT
GCCATCCGCG CTATGAGATC GGGCAAGGAC GTGATGACCG ACAAGCCGGG CGTGACGGCC
TTCGCCCAGC TCGAGGACGT CAAGAAGACG GTCGCTGAAA CCGGCAAGAT CTTTTCGATC
TGCTTTTCCG AACGCCATTG CGTGCGCTCC GCCGTCAAGG CCGGAAAGCT GGTGAAAGAA
GGCGCGATCG GTAAAGTGAT CCAGACGCTC GGCGTTGGTC CACACCGGCT GCAACTGCCG
ACCCGGCCGG ACTGGTTCTT CGATCCCGAA GCCTTCGGCG GCATCATCGT CGATATCGCT
TCACACCAGG TCGATCAGTT CCTGTTCTAT ACCGGCTCGA CCACAGGCGA GGTCATCGCC
AGCTCGATCG GCAATTTCGG CATGCCCGAC AAGCCCGCCT TCGAGGATTT CGGCGAGGTG
CTTCTGCGTT CCGACAAGGC GGCGGGCTAT GTCCGTGTCG ACTGGTTCAC GCCGGAGGCG
CTGCCGACCT GGGGCGACGG GCGCCTGACC ATTCTCGGCA CCGAAGGCTA CATCGAACTG
CGCAAATATA TCGATATCTC CGGCCGGCCG GGCAAGGATC ACCTCTTCCT GGTCAACGGC
AAGGAAATGA CCCATATCGA TTGCAGCGGC GAAAAACTCG ATTATTTCGA TGCTTTCACC
ACTGACGTCG GCAACCGTAC GCAGACGGCG ATGACCCAGG ATCATGTTTT CGAAGTCTGC
CGCCTTTCGC TCGAAGCCCA GGCGAAAGCT GCCCGCATCG GCGCCCGCTG A
 
Protein sequence
MLRFAVVGID HGHTFDHVKG LLAAGGEFVG YCPQTSVPAL REGFEKTYPD APQIDRQKLF 
DDPSIDVICI SAIPRDRAGL AIRAMRSGKD VMTDKPGVTA FAQLEDVKKT VAETGKIFSI
CFSERHCVRS AVKAGKLVKE GAIGKVIQTL GVGPHRLQLP TRPDWFFDPE AFGGIIVDIA
SHQVDQFLFY TGSTTGEVIA SSIGNFGMPD KPAFEDFGEV LLRSDKAAGY VRVDWFTPEA
LPTWGDGRLT ILGTEGYIEL RKYIDISGRP GKDHLFLVNG KEMTHIDCSG EKLDYFDAFT
TDVGNRTQTA MTQDHVFEVC RLSLEAQAKA ARIGAR