| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6083 |
|---|
| Symbol | |
|---|
| ID | 8016040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | + |
|---|
| Start bp | 116762 |
|---|
| End bp | 118621 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644827389 |
|---|
| Product | glycoside hydrolase 15-related |
|---|
| Protein accession | YP_002978589 |
|---|
| Protein GI | 241258705 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAA GTGGCGGGTT GCTCGAGAAT AAGGTTTCCG CAGAGCATAG CCAGGACGCA
GCCGTCGTTC CGCGCGCGAT AGAGAAGCAC GGCGTCATCG GCGATTTGGC AACGATCGCG
CTTGTCGCTA CCGATGGCAC GATAGACTTT CTGTGCTGGC CCGATTTCGA CAGTCCAACG
ATTTTTGCTG CGCTGCTCGA TCCGGAACGT GGTGGCATGT TTCAGATCGC TCCGGAGCTT
GCAGATGCCC GCGTGACGCA GCAGTACCTT CCGGATACGA ACGTCCTCCT CACACGTTGG
ATGGCTGACA AGGCAAGCGG CGAACTCACC GACTTCATGT ACGTGAAGGA CAGACGTAGC
GGCGGCTCGA GCATGATCAT CCGGCGCTTT CGTGCGACGC GCGGGAGTTT GAAAGTGCGT
ATGTCGTGCG CTCCTCGGTT CGAATACGCG ACGAGACAGA TCCCAGTGGA GTTTGAAGAC
GGCGCTGTGA TCTGGCGGCA GACGAATGGC GAAGTTCTAC GACTTTTGAC CAGCGCGCCA
CTTGTCGAGA TCGACGGCGC CGTCATCGCA GAGATGACCC TCCAAGCTGG AGAAGGTGTC
GATTTCATTC TCGACGACGG TGTCGATAGT GCGGAAGAAG CAACTTCGGA GACAATGGAA
GAGCAGACGG TCGCTTTCTG GCAGAACTGG GCACGACAAT CGACCTACCG GGGACGCTGG
CGGGAAATGG TCAATCGCTC CGCACTGGCA TTGAAGCTCA TGACCTCGCG CAAGCACGGT
TCGATCGTCG CCGCCGCGAC GTTCGGCTTG CCGGAAACGC CCGGTGGCAG CCGCAACTGG
GACTACCGCG CCACCTGGAT ACGCGACGCC TCGTTTACGG TCTACGCGTT GATGAGGCTT
GGCTATCGCG AGGAGGCGAT GGCATTTAAC GACTGGATCG GCCAGCGGGC GTCGGCATGT
GAGCCGGGCG GCCGACTGAA AATCATGTAT GCGATCGACG GCGGCGAGGT GCCCGACGAA
AAGAGCCTCG ATCATCTGCG CGGCTACGGC GGTGCGACGC CGGTCCGGGT GGGCAACAAG
GCTGCAGAAC AGTTCCAGCT CGACATCTAT GGCGAGCTTC TCGACTCCAT CTATCTGAGC
AACAAATACG GCCACGCGAT CTCTCACGAC CACTGGGAGG GGGTGCGAGA GGTCGTGGAG
TATGTCTGCG ACCATTGGCA GGATCCTGAC GCGGGGATCT GGGAAATGCG CCGCGAGCCA
CAGGAGTTTC TCCATTCGAG GCTCATGTGC TGGGTGGCAG TCGATCGGGG AATTCGCCTC
GCGACCAAGC GATCTCTCGC GGCGCCCTTT TCCAAATGGC ATGACATCAG GAATGACATT
TACGAAGACA TTTGGAAAAA CTTCTGGAAC GAGGAGAAAG GGCACTTTGT GCAGACCAAG
AGCGGCGACA TGCTCGACGC GTCGCTGCTG CTCATGCCGC TTGTAAGATT TGTCAGCGCC
ACGGACCCGA GGTGGCTGTC CACATTGAAA GCGATCGGCG ACCAACTGGC GGATGACGGC
GTCGTGCACC GGTATCGAAG CAACGACGGC CTTGAGGGGG AGGAGGGTGC CTTTTCAGCC
TGCTCGTTCT GGTATGCCGA GTGTCTTGCA CGAGCCGGCG ACACCAAGAG AGCCCGCAAG
GTCTTTGAGT CAGTTCTGAA TTATGCCAAC CATCTCGGCC TGTACGCCGA AGAGTTTGAT
ACCAAGGCGC AGCTCGCTGG CAATTTCCCG CAGGCTTTTA CCCATCTCGC CCTCATCAGC
GCAGCGTTCT ATCTGGATCG CGAGCTCGAC GATCGCAATA AGCAGGAATG GCGCCCCTAA
|
|---|
| Protein sequence | MDASGGLLEN KVSAEHSQDA AVVPRAIEKH GVIGDLATIA LVATDGTIDF LCWPDFDSPT
IFAALLDPER GGMFQIAPEL ADARVTQQYL PDTNVLLTRW MADKASGELT DFMYVKDRRS
GGSSMIIRRF RATRGSLKVR MSCAPRFEYA TRQIPVEFED GAVIWRQTNG EVLRLLTSAP
LVEIDGAVIA EMTLQAGEGV DFILDDGVDS AEEATSETME EQTVAFWQNW ARQSTYRGRW
REMVNRSALA LKLMTSRKHG SIVAAATFGL PETPGGSRNW DYRATWIRDA SFTVYALMRL
GYREEAMAFN DWIGQRASAC EPGGRLKIMY AIDGGEVPDE KSLDHLRGYG GATPVRVGNK
AAEQFQLDIY GELLDSIYLS NKYGHAISHD HWEGVREVVE YVCDHWQDPD AGIWEMRREP
QEFLHSRLMC WVAVDRGIRL ATKRSLAAPF SKWHDIRNDI YEDIWKNFWN EEKGHFVQTK
SGDMLDASLL LMPLVRFVSA TDPRWLSTLK AIGDQLADDG VVHRYRSNDG LEGEEGAFSA
CSFWYAECLA RAGDTKRARK VFESVLNYAN HLGLYAEEFD TKAQLAGNFP QAFTHLALIS
AAFYLDRELD DRNKQEWRP
|
|---|
| |