Gene Rleg_6051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6051 
Symbol 
ID8016313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp84244 
End bp85383 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content60% 
IMG OID644827359 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_002978559 
Protein GI241258675 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAC TGAAAGCCGG CGTCGCAAGC GAGACACATC ACCCGGCAAT CCCGACGTGG 
ACGTGGCTCT CCCCGCTCTT GGCATCCCTG CTTCTCGCCG TGAAGTTTCT CCACTTCGTT
CCCTCCGACG GTCCGGTGGT CCTTGTTCTT GCCGGTATCC TGCTTGCCGC CGCCGTCTTT
AGCGCAGTTC ACCACGCGGA AGTCCTCGCG CTTAAGCTCG GCGAGCCATT TGGTTCGATC
CTGTTGGCAA TCGCTGTCAC GGTCATCGAA GTCGCATTGA TCGTCTCGAT TATGGTGTCC
GGGGCTGAAG GCAGCGGCTC CGTCGCGCGG GATACCGTGT TCGCTGCCGT GATGATCGTG
CTTAATGGCG TCGTCGGGCT TTGTCTGATC ATGGGAGGAA GCCGGCACTT CGAGCAGTCG
TTCCAGCTTA AGGGTGCGTC CTCCGCCCTA GCGGTGCTCG GCACCCTCGC CGCCTTGGCG
TTGATCCTCC CAAATCACAC GCTGACAGTT CTCGGCCCGT CTTATTCTCC ACTCCAGGCG
ATGTTCATCG GCATCGTTTC TCTGATGCTC TGGGGCGTCT TCGTCTTCGT GCAAACGGTC
AAGCATCGCG CCTACTTCTT GGATGCCCCC GCTGAAGATG TGATCGATGA GGACATGACG
GAGGGCTACC ACCCGAAGCC TTCAGACCGG GAAGCCCAGG CATGCCTGGG TCTGTTGCTG
GTTTCGCTCG TCGCCGTCGT TCTTCTGGCG AAGACCTTGT CGCCTTCTCT CGATGCGGCC
ATCGATCTTG CCGGACTGCC GCACACCTTT GTCGGCGTGG TCATCGCCGC GATCGTGCTT
TTGCCGGAAG GGATTGCCGC AGCGAAATCC GCCCTCAAGA ACCAGCTTCA GAACAGCATC
AACTTAGCTC TCGGATCGGC CATCGCGAGT ATCGGGTTGA CCATACCCTC TGTCGCGGTG
GTCTCGCTTG TTCTTGACCA GCAACTGGCC CTGGGCATCT CGGCCGCGAA CACGACGCTG
CTAGTGCTTA CCTTGTTCGT GAGCACCCTG ACCCTGGGAA CCGGCCGCAC GACGGTGCTA
CAAGGGGCGA TCCATCTGGT GATATTTGCC GTGTTCTTGC TGGTTTCGGC GATCCCCTAG
 
Protein sequence
MNVLKAGVAS ETHHPAIPTW TWLSPLLASL LLAVKFLHFV PSDGPVVLVL AGILLAAAVF 
SAVHHAEVLA LKLGEPFGSI LLAIAVTVIE VALIVSIMVS GAEGSGSVAR DTVFAAVMIV
LNGVVGLCLI MGGSRHFEQS FQLKGASSAL AVLGTLAALA LILPNHTLTV LGPSYSPLQA
MFIGIVSLML WGVFVFVQTV KHRAYFLDAP AEDVIDEDMT EGYHPKPSDR EAQACLGLLL
VSLVAVVLLA KTLSPSLDAA IDLAGLPHTF VGVVIAAIVL LPEGIAAAKS ALKNQLQNSI
NLALGSAIAS IGLTIPSVAV VSLVLDQQLA LGISAANTTL LVLTLFVSTL TLGTGRTTVL
QGAIHLVIFA VFLLVSAIP