Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5943 |
Symbol | |
ID | 8016363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 487607 |
End bp | 488140 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644828056 |
Product | hypothetical protein |
Protein accession | YP_002979256 |
Protein GI | 241518628 |
COG category | [S] Function unknown |
COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0572526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTTTA GGAGACGGAA GCCGCTCTCA CTGGCTCAGC GGATCCGTGC CCTCGTTTGG CCATCCAAGG GGCTATTGCG GTCCATCCGG TACATTGCCA TTCGAGTGCT TCGATTGAAG GCTACTCCTC ATGCAGTTGC GGCTGGCGTT GCAGCAGGGG TGGCCGTGTC CTGTACCCCC TTTCTCGGCT TTCATTTCAT AATGGCATTT TGTCTGGCCT TCATCCTCAG AGGCAATATG ATCGCGGCTG CGCTCGGGAC GGCGTTTGGG AACCCTCTTA CCTTTCCGCT GATCTTTGCT GCCGCCTACC GGATCGGAAT CTTTCTTTTG GGTCGCGCGC CCGAGAGGGT GGGTGAAGCC AATCTGTTCA CCCTGCTCCG GCACCTCGAT TTTGCACCGC TTTGGCATCC CATTCTAAAG CCGATACTTG TCGGCGGCCT TCCGCTCGCC GCGCTATCCG GTGCAGTCTT TTATGTATTG ACGTGGCAAG GCGTTCGCCT GTTCCAGCAG CGAGGAAAGC GGCGGAAATC GTAA
|
Protein sequence | MLFRRRKPLS LAQRIRALVW PSKGLLRSIR YIAIRVLRLK ATPHAVAAGV AAGVAVSCTP FLGFHFIMAF CLAFILRGNM IAAALGTAFG NPLTFPLIFA AAYRIGIFLL GRAPERVGEA NLFTLLRHLD FAPLWHPILK PILVGGLPLA ALSGAVFYVL TWQGVRLFQQ RGKRRKS
|
| |