| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5904 |
|---|
| Symbol | |
|---|
| ID | 8016539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012853 |
|---|
| Strand | - |
|---|
| Start bp | 457019 |
|---|
| End bp | 457816 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644828021 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002979221 |
|---|
| Protein GI | 241518593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.708406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AAACCGGAAA AGGCCTTGCC GTCGTCACAG GTGCATCGAC GGGTATCGGC
TATGAACTGG CAAAATGTGC CGCCCAGGAC GGCTACGATC TAATCATTGC AGCCGATGAA
GCACGCATCC ATCAGGCCGC AGCCAGCTTG AAGGAGTTTG GCACCTCGGT GGATGCGATC
GAAGCCGATC TGTCTACGGA GGAAGGTGTC GACCGCCTTC TTGAAAAAAT CGAGGCATCT
GGCCGCTCCG TCGATCTGTT GATGGCCAAT GCCGGCAGGG GACTTGGTAA GGGCTTCCTC
GATCAGGACT TCGTCGAGGC CCGCAAGGTC GTAGACACGA ACATCGTCGG CACCATCTAC
CTCGTGCAAC AGGTCGGCAA TCTGATGCGC AGCCGCGGAC AAGGCCGCAT CCTGCTGACC
GGTTCGATTG CCGGCTTTAT GCCCGGATCT TATCAGGCCG TCTACAATGG CACCAAGGCA
TTCATCAACA GCTTCTCCTT CGCGTTGCGC GAAGAGCTGA AAGACAGTGG CATTACGGTG
AGCTGCCTGA TGCCGGGTCC GACGGAGACT GAGTTCTTCC AACGCGCTGA CCTGACGGAC
ACTTCCGTCG GTCAGGCGAA GAAGGATGAC CCGGCCGACG TTGCCAAGGT CGGTTACGAC
GCGATGATGG ATGGCGAAGG TGATGTCGTC AGCGGCTGGA AGAACAAGCT GCAAGCCGCC
GTCGCCAATG TCACGCCCGC GAGCATGCTG GCCCACCAGC ACGCCAAGAT GGCCGAGCCG
GGTTCAGGCA AAAACTAA
|
|---|
| Protein sequence | MAIETGKGLA VVTGASTGIG YELAKCAAQD GYDLIIAADE ARIHQAAASL KEFGTSVDAI
EADLSTEEGV DRLLEKIEAS GRSVDLLMAN AGRGLGKGFL DQDFVEARKV VDTNIVGTIY
LVQQVGNLMR SRGQGRILLT GSIAGFMPGS YQAVYNGTKA FINSFSFALR EELKDSGITV
SCLMPGPTET EFFQRADLTD TSVGQAKKDD PADVAKVGYD AMMDGEGDVV SGWKNKLQAA
VANVTPASML AHQHAKMAEP GSGKN
|
|---|
| |