| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5752 |
|---|
| Symbol | |
|---|
| ID | 8016715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012853 |
|---|
| Strand | - |
|---|
| Start bp | 336240 |
|---|
| End bp | 336986 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644827896 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002979096 |
|---|
| Protein GI | 241518468 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.213287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAATC ACCTTCATAT GATCTCACTG GAAAACGTGT GGTCGTCGTC GGCGGCAAAA
CAGGGGATAG GGCTCGGCAT CGCTCAGGCC GCTCACGCGG CGGGAGCGAG CGTAACGGTC
GCCAGCCGGC GCTCGGTTTC TTCAGCAGAC CATCCAGAGC TGGCGCCCTT CGAGCAGCTA
GTGCTCGACA TTAGCGATGA GGACGACGTT CGGGCTTCCT TCAAGGCAAT TGGCAATCTG
GATCATTTGC TTGTCGCTGC GGGGCCAACC GATGGCAGCT GGGGTGCATT CATGGACGAA
GACATGCGAG GGGCGCGCAG CTACGGCAAT AGCAAGTTTC TCGGCTCCTG GGCATGTGCG
CGCTATGCTG TACCAAAACT CTCCTCTAAC GGGTCGATCA CCTTTATGAC CGGAGGGATC
GCGGCCCGTT CGAAGATCGG CATGACGAGC GTCACATCGA CTTTTGCCGC AGTGGAGGCA
CTCGCGCGCT CGCTGGCGCT CGAACTTGGC CCAATCAGGG TAAACGTCAT TCGGCCTGGG
TTCATCGATA CCGACCTTTG GAACTTCCTT TCCGCGACAG ACGCCGCTGA TGTCCGCGAA
AAGGTGCGCG CCAATTTCCC AGCGCGCCGG ATCGGTCAAC CGGCCGACGT GGGGCACGCT
GCGGTGTTTT TGATGACCAA CCCCTACGTT ACAGGCACTG TGCTTGAGGT GTCTGGCGGA
GAGCAGCTCG TCGATTGGCA GTTCTGA
|
|---|
| Protein sequence | MRNHLHMISL ENVWSSSAAK QGIGLGIAQA AHAAGASVTV ASRRSVSSAD HPELAPFEQL
VLDISDEDDV RASFKAIGNL DHLLVAAGPT DGSWGAFMDE DMRGARSYGN SKFLGSWACA
RYAVPKLSSN GSITFMTGGI AARSKIGMTS VTSTFAAVEA LARSLALELG PIRVNVIRPG
FIDTDLWNFL SATDAADVRE KVRANFPARR IGQPADVGHA AVFLMTNPYV TGTVLEVSGG
EQLVDWQF
|
|---|
| |