Gene Rleg_5695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5695 
Symbol 
ID8016658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp278953 
End bp280050 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID644827848 
ProductABC transporter related 
Protein accessionYP_002979048 
Protein GI241518420 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.6347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0823174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCT TGTCCATCAG GGATGTTCAA AAGTCTTATG GCGCATTCAA GGTGCTGCAC 
GGAGTAGACG TCGACCTCGA GGATGGTGGC TTTCTCGTGC TCCTTGGACC GTCAGGATGC
GGCAAGTCGA CCTTGCTCAA TATCATTGCG GGATTGGATG AGCCGTCGTC TGGTGATATC
GCGATCGGCG ATCGATCCGT GACGGCCCTC CCACCGAAGG ATCGAAACAT CGCCATGGTA
TTCCAGTCCT ACGCGCTCTA TCCGACCATG TCGGTTGAGC GGAACATTGG CTTTGGCCTC
GAGATGCGTG GTGTTCCGGA GCAGCAGCGC AGGGCGGAGG TGCAAAAGGC GGCCGAACTG
CTGCAGATCG GCCACCTTCT CGATCGGCTT CCAGCCAACC TCTCCGGCGG GCAGAGGCAG
CGCGTTGCCA TGGGGCGGGC GATTGTTCGC AGTCCGGATC TGTTTCTCTT CGACGAGCCG
CTCTCAAACC TTGACGCGAA GCTGCGCGTC GAGATGAGGA CCGAGATAAA AAGGCTGCAC
GAACGCCTCG GCACGACTAT CGTCTACGTG ACCCACGATC AGATCGAGGC GATGACGCTG
GCGACCAAAG TCGCGGTGAT GAAGGGCGGC TATGTCCAGC AGCTTGCCGA TCCCAGGACC
ATCTACGAAC GACCTGCGAA CATGTTCGTC GCCGGCTTTA TCGGATCTCC CGCGATGAAC
TTCATCAGGG GCGAATTGAT CTCGGACGAC GGCGGCTCCC GGTTTGAGAG CGGTGGCGTG
ATCGTGCCTG TCAGTATACC AGATAGCGCA GCCAGACGCC GGGATTGTGT CCTTGGGGTA
AGACCGGAAG AGCTTAAGGT CGTCGAGAGG GATAATGCCG CGATCCACGG AGTGATAGAC
GTCGTGGAAC CAACGGGTCC AGACACAATG GTCACCGCTG TGGTTGGCGA CCACGCGATC
GTGGCCAGAG CTGAAGCGCG CTTCCAGGGA CGCAGAAGCG ATCAGGTTCG TTTTAGCGTC
GATGCGCAGA GCATCAACCT GTTCGATGCT GAAACTCAGG ATCGAATAGA AACGGGGGTT
AACCCACAGC ACTTGTGA
 
Protein sequence
MSSLSIRDVQ KSYGAFKVLH GVDVDLEDGG FLVLLGPSGC GKSTLLNIIA GLDEPSSGDI 
AIGDRSVTAL PPKDRNIAMV FQSYALYPTM SVERNIGFGL EMRGVPEQQR RAEVQKAAEL
LQIGHLLDRL PANLSGGQRQ RVAMGRAIVR SPDLFLFDEP LSNLDAKLRV EMRTEIKRLH
ERLGTTIVYV THDQIEAMTL ATKVAVMKGG YVQQLADPRT IYERPANMFV AGFIGSPAMN
FIRGELISDD GGSRFESGGV IVPVSIPDSA ARRRDCVLGV RPEELKVVER DNAAIHGVID
VVEPTGPDTM VTAVVGDHAI VARAEARFQG RRSDQVRFSV DAQSINLFDA ETQDRIETGV
NPQHL