Gene Rleg_5678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5678 
Symbol 
ID8016641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp257373 
End bp258470 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID644827831 
ProductABC transporter related 
Protein accessionYP_002979031 
Protein GI241518403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.209131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.1873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAGCG TAGAATTGCA GAATATCGAC AAAACCTATG GGAGCTTTGA GGCGATCGGC 
AATCTCAATC TGAGCGTCGA CGATGGCTCG TTCACGGTGT TCGTCGGCCC TTCCGGCTGT
GGAAAATCGA CGCTGCTACG GATGATCGCC GGCCTCGAAA AGATCACGGC AGGCGACCTC
AAGATCGACG GGCGGCGGAT GAACGAAGCC GATCCGATCG AGCGCGGCGT GGCCATGGTT
TTCCAGAACT ACGCGCTCTA CCCGCATATG ACCGTCGAGC AGAATATCGG CTTCTCGCTG
CGCATGGCGG GCCTTGGAAA AGCCGAGATC CAGCGCAGCG TTGCCGTTGC GGCGGCAACA
CTGCAGATAG AACCGCTGAT GAAGCGCAAG CCGGCGCAAC TCTCCGGTGG TCAGCGTCAG
CGTGTCGCCA TCGGCCGGGC GATCGTGCGC AATCCCGCCG TCTTCCTGTT CGACGAGCCG
CTGTCGAACC TCGACGCTGA ACTCAGGGTG TCCATGCGTG TCGAGATCGC GAAACTGCAC
CGGCGCATCG GCGCAACGAT GATCTATGTC ACCCATGACC AGACGGAAGC GATGACGCTG
GCCGACAAGA TCGTCGTCAT GCGAGCAGGC AAGATCGAGC AGACAGGGAC ACCGGATACG
CTCTATGCCG ACCCCGACAA CCTCTTCGTC GCCGGTTTCA TCGGCTCCCC GCGGATGAAT
TTCCTGGATG GCACGCTGGA CCCCAATGGC GTTGTCAGGC TCGATTGCGG CGCTGTCTTC
AAGACGGGCC TTTTGCACGG CGAAGGCGAC ATCTTGATCA AGGCCGGCAT TCGGCCCGAG
CACTTCACCG GACACGACGA TGCCGGCGGC GCAATTGACC TCAAGGTCGA CGTGGTGGAA
AATCTCGGCG GCACCCGTTT CATCTATGGC ACGCTGAGTT CCGGGCAGGC CGTCATCATC
GAGGACCGCT CCGAGACCAT CCGCCGCCCC GGGGAAAGCG TCACCGCCGG CTTCCCCGCA
CGAAGGGCCC TGCTCTTCGG TGGGGACGGT GAGCGCATCC GCGGGGCGCG CCCGGCAAAC
ACCCTTCCGG CGGGGTAG
 
Protein sequence
MASVELQNID KTYGSFEAIG NLNLSVDDGS FTVFVGPSGC GKSTLLRMIA GLEKITAGDL 
KIDGRRMNEA DPIERGVAMV FQNYALYPHM TVEQNIGFSL RMAGLGKAEI QRSVAVAAAT
LQIEPLMKRK PAQLSGGQRQ RVAIGRAIVR NPAVFLFDEP LSNLDAELRV SMRVEIAKLH
RRIGATMIYV THDQTEAMTL ADKIVVMRAG KIEQTGTPDT LYADPDNLFV AGFIGSPRMN
FLDGTLDPNG VVRLDCGAVF KTGLLHGEGD ILIKAGIRPE HFTGHDDAGG AIDLKVDVVE
NLGGTRFIYG TLSSGQAVII EDRSETIRRP GESVTAGFPA RRALLFGGDG ERIRGARPAN
TLPAG