Gene Rleg_5600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5600 
Symbol 
ID8016826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp181136 
End bp182101 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID644827766 
Productdehydrogenase/flavin-dependent oxidoreductase protein 
Protein accessionYP_002978966 
Protein GI241518338 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03557] F420-dependent oxidoreductase, G6PDH family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00421173 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGATAG GTTATCATGC GTCGCATGAG CAGTTCTCGC CCAGCGAACT CTTATGCTTT 
GTTCAGGCTG CAGAGCGCGC TGGTTTCGGT GCCGTCATGA CGTCCGACCA TATCGCGCCA
TGGAGCGAGG AGCAGGGAAA TTCGGGTAAC AACTGGGCCT GGCTCGGCGC AGCACTTGCA
ACGACATCGC TGCCGTTCGG TAGTCTCGCG ATCCCCGGTG GCTGGCGCTA CCACCCAGCC
CTACTTGCGC ATTTGGCCGG CACCCTCGCC GAGATGTACC CGAACCGTTT TCGATGGATT
GCAGTCGGTA GCGGTGAAGC CCTGAACGAA AGCGTCGTGG GCAGCGGCTG GCCCGAAAAA
GCAGAACGCG ACGCGCGGCT TCGTGCCGGT GCCGGGATTG TCCGGGATCT CCTTCGCGGA
GAAACGGTCA CCGTTCGTTA TCCCTGGTTC GCGGTGGAGG AAGCCAAGCT CTGGTCCCTG
GCTGAGCGGC CGCCAGCGAT ATTTGGCGCC GCCTTGAGCG CCAAGACGGC AGGGTGGATG
GGCGACTGGG TCGACGGCTT GATAACAGTG CGGAAATCCA AAGAGAGCAT GCAAGAGCTT
GTCGGCCGCT TCGAAGATAA TGGCGGCCAC GGCAAGCCGC TCGTCTTGCA GCTTCAGGTT
TCGTGGGCAA TGTCGAGGGA GGAAGCGCGT CTGGCGGCCT GGGAGCGGTG GCGCAATGCG
GCCGTGCCAC CGACTGTCTT AGCTGACCTG AAGCGCCCCA AGGACTTCGA CGAGGTGACC
AACACCCTCA GGCCCGAGGA CATAGAAGAG TTCGTCCCAC TAATTACAGA AGGATCCGAG
CTGCTAGAAA TCATCAGTGA ATTGGCATCA TGCGGATTCG AGGAAGTCTA TTTGCACAAT
GTTTCCTTGG ATCAACATGG CTTCATGCGG TTCATGGCGC AGGAAGTCTT GCCGCATATC
CGCTAG
 
Protein sequence
MLIGYHASHE QFSPSELLCF VQAAERAGFG AVMTSDHIAP WSEEQGNSGN NWAWLGAALA 
TTSLPFGSLA IPGGWRYHPA LLAHLAGTLA EMYPNRFRWI AVGSGEALNE SVVGSGWPEK
AERDARLRAG AGIVRDLLRG ETVTVRYPWF AVEEAKLWSL AERPPAIFGA ALSAKTAGWM
GDWVDGLITV RKSKESMQEL VGRFEDNGGH GKPLVLQLQV SWAMSREEAR LAAWERWRNA
AVPPTVLADL KRPKDFDEVT NTLRPEDIEE FVPLITEGSE LLEIISELAS CGFEEVYLHN
VSLDQHGFMR FMAQEVLPHI R