| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5517 |
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| Symbol | |
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| ID | 8016408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | + |
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| Start bp | 103326 |
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| End bp | 105323 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644827684 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002978884 |
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| Protein GI | 241518256 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | [TIGR02767] Ti-type conjugative transfer system protien TraG |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0112559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGA ATAAGATCGC GCTGGTCAGC GTGCCCATAG CACTGATGAT GCTCGTCACC
ATCGGCATGA CGGGTATCGA ACAATGGTTT TCCGAATTCG GGAAAACCGA GACAGCGCGG
CTGACCCTCG GTCGGATGGG AATCGCCTTG CCCTATATCG CGTCAGCCGC CGCCGGCATC
ATCTTTCTGT TTGCGAGCGC CGGCTCAACG AACATCAAGC TCGCCGGATG GGGTGTTGTC
GGCGGTAGCA GTGCGACGAT CGTGATCGCC GCGCTGCGTG AGACCGTGCG ACTTGCCGCA
ATTTTCGACC ATTTTCCGGC AGTTCGATCG GCGCTCTCCT ATGCAGACCC GGCAACGATG
ATCGGGGCAG GGGCGGCGCT GACGTCGGCC GGCTTTGCAC TTCGCGTAGC ACTTGTCGGC
AACGCGGCGT TCGCGCGCTC CGAGCCGCGC CGTATTCGAG GAAGGCGCGC ACTGCATGGA
GAAGCCGAGT GGATGAAATC GACGGAGGCC GGAAAGCTCT TTCCGGATAC CGGCGGCATC
GTCGTCGGCG AGCGCTACCG CGTCGACCAG GACATAACGG CGATGCGGTC GTTCAGGGCG
GATTGCGTGG AGACGTGGGG CGCCGGCGGC AAGTCGCCGC TTCTCTGCTT CGACGGCTCG
TTCGGATCCT CGCACGGCAT CGTCTTTGCC GGCTCAGGCG GTTTCAAGAC GACGTCGGTG
ACGATCCCGA CCGCGCTTAA ATGGGGCGGT ACATTGGTCT TGTTGGATCC GTCAAACGAA
GTCGCGCCCA TGGTGATCGG GCATCGGACA AACGCCGGAC GCGACGTCCG CATCCTCGAT
CCAAGAACCG CCGACACGGG CTTCAATGCG CTGGACTGGA TCGGGCTTCA TGGCCGCACG
AAGGAAGAGG ATATTGCCGC CGTTGCCTCA TGGATCATGA GCGACAGCGG CGGTGCTCGC
GGCGTGCGCG ACGATTTCTT TCGCGCATCG GCGCTGCAGC TGTTGACCGC ATTGATCGCC
GACGTCTGTC TATCCGGCCG CACCGAAGAG AACGACCAGA CACTTCGCCA AGTCCGCAAG
AATCTGTCCG AGCCCGAACC GAAGCTGCGC GCGCGACTGC AGTCGATCTA CGACAATTCG
AGATCCGACT TCGTAAAGGA GAACGTCGCC GCCTTCGTCA ACATGACGCC AGAAACGTTT
AGCGGGGTTT ACGCGAATGC GGTGAAGGAG ACGCACTGGC TGTCCTATCC GAATTATGCG
GCGCTTGTCT CGGAGTCGAA TTTTTCGACC AACGACATTT CCGCGGGAAA CACGGATGTC
TTCATCAACA TCGACCTGAA GACGCTGGAG ACGCATTCGG GTCTTGCTCG CGTCATCATC
GGGTCCTTCC TGAACGCGAT CTACAATCGT GATGGAGCAT TGAAGGGCAG GGCGCTGTTC
CTTTTGGACG AGGTGGCACG CCTGGGCTAC ATGCGGATTC TGGAGACGGC TCGTGACGCC
GGCCGAAAAT ACGGCATCAC GCTGACAATG ATTTACCAGT CGATCGGCCA GATGCGAGAA
ACCTATGGCG GCCGCGACGC GGCGAGCAAA TGGTTTGAGA GTGCGAGCTG GATCTCGTTT
GCTGCCATCA ACGATCCGGA AACGGCCGAC TACATCTCGC GACGCTGCGG CATGACGACG
GTCGAGATCG ATCAGGTCAG TCGCAGTGTC CAGTCGAAGG GTTCATCGCG CACGCGCTCG
AAACAGCTTG CCGCCAGACC GCTCATCCAG CCGCACGAAG TTCTGCGCAT GCGGGCCGAC
GAGCAGATCG TCTTCACGGC AGGCAATGCG CCGCTTCGAT GCGGTCGTGC GATCTGGTTC
CGTCGTGACG ATATGAAGGC TTGCGTCGGC GAGAACCGGT TTCATTCACC GGACAGCGGC
AGGAAGGAGC GTTCGAATGC GATAAATCTC GCAAACACCG ATGAAGCTAC GTCGGGTGTA
GCGTCTACCG GGATCTAG
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| Protein sequence | MTANKIALVS VPIALMMLVT IGMTGIEQWF SEFGKTETAR LTLGRMGIAL PYIASAAAGI
IFLFASAGST NIKLAGWGVV GGSSATIVIA ALRETVRLAA IFDHFPAVRS ALSYADPATM
IGAGAALTSA GFALRVALVG NAAFARSEPR RIRGRRALHG EAEWMKSTEA GKLFPDTGGI
VVGERYRVDQ DITAMRSFRA DCVETWGAGG KSPLLCFDGS FGSSHGIVFA GSGGFKTTSV
TIPTALKWGG TLVLLDPSNE VAPMVIGHRT NAGRDVRILD PRTADTGFNA LDWIGLHGRT
KEEDIAAVAS WIMSDSGGAR GVRDDFFRAS ALQLLTALIA DVCLSGRTEE NDQTLRQVRK
NLSEPEPKLR ARLQSIYDNS RSDFVKENVA AFVNMTPETF SGVYANAVKE THWLSYPNYA
ALVSESNFST NDISAGNTDV FINIDLKTLE THSGLARVII GSFLNAIYNR DGALKGRALF
LLDEVARLGY MRILETARDA GRKYGITLTM IYQSIGQMRE TYGGRDAASK WFESASWISF
AAINDPETAD YISRRCGMTT VEIDQVSRSV QSKGSSRTRS KQLAARPLIQ PHEVLRMRAD
EQIVFTAGNA PLRCGRAIWF RRDDMKACVG ENRFHSPDSG RKERSNAINL ANTDEATSGV
ASTGI
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