Gene Rleg_5411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5411 
Symbol 
ID8007369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp828189 
End bp828911 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID644822315 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002973575 
Protein GI241113740 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTC TGATCGTCGA GGACGACCCG CTGCACCGGT CCTATCTGCA CGAGGCGGTC 
AACGCGGCTC TGCCGGAATG CGATACGGTG ATCGAGGCGG AGAATGGAAC CGTCGGCGAG
AAGCTCGCCC GCGACCACAA GTCGGCGCAT ATCGTCATGG ACCTGCAGAT GGCAAACCGC
AACGGCATCG AGGCGGCGCG CACCATCTGG AAGGAGCGGC CGGAGACCCG CATCCTGTTC
TGGTCGAATT ACTCGGACGA GGCCTACGTA CGGGGCGTCT CGCGCATCGT GCCGGATGGC
GCCGCCTATG GCTATGTGCT GAAATCCGCC TCCGACGAGC GGCTGAAGCT TGCGCTGCGC
TCGATCTTCA TCGAGAGCCA GTGCGTCATC GACCGCGAGG TGCGGGGCCT GCAGCAAAAG
AGCCTCGGCC AGACGAACGG CTTTACCGAT TCCGAATACG AGATCCTTGT CGATATCGCG
CTCGGCCTCA CCGACCGGGC CATCGCCAAA CGTCGGGGCC TTTCCCTGCG CAGCGTGCAG
AACCGCCTGC AGCAGCTCTA CGACAAGCTC GACGTCTACC AGAGCGCCGG CGACGACCAC
GAGGACGGCC GCTTCAATTT GCGCGCCCGC GCCGTCACCG TCGCTTTCCT GCGCAAACTC
CTGAACTACA GCGCTCTGGA GCGGGCTGAG GCAGAACTGC AGGAATGGCT TGAGGGAAAG
TAG
 
Protein sequence
MKVLIVEDDP LHRSYLHEAV NAALPECDTV IEAENGTVGE KLARDHKSAH IVMDLQMANR 
NGIEAARTIW KERPETRILF WSNYSDEAYV RGVSRIVPDG AAYGYVLKSA SDERLKLALR
SIFIESQCVI DREVRGLQQK SLGQTNGFTD SEYEILVDIA LGLTDRAIAK RRGLSLRSVQ
NRLQQLYDKL DVYQSAGDDH EDGRFNLRAR AVTVAFLRKL LNYSALERAE AELQEWLEGK