Gene Rleg_5387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5387 
Symbol 
ID8007345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp799480 
End bp800337 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID644822291 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973551 
Protein GI241113716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.76333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG ATACCATCAG CACGACCACA GACACCCCTA AAGCCGCCAG CTTCGTCTCC 
TCACGGCGCT GGCTTTTGTG GAGCGGCATC GCCGCCCTAT GCGCCTGGGT GCTGGTGCCG
ATCTATCTGG TGGCGCTCGG GGCGCTCGGT GGTCGCCAGG GCGTCTATGT CTGGCCGAAG
ACCGGTCTTC CCGCCGGCAT ATCGCTCGAG CCCTTTTTTC TCTTTCTGAA GACCGAAGGC
GTCGTCCAGT CCTTCCTCAA TTCGCTGGGG GCAGCCGCCA TCACGGTGGC GCTTTCGATC
CTGCTCGGCG CGCCGGCAGG TTACGCGCTC GCCCGCTACG ATTTCCGCGG CAAGGACAGC
TACCGCCTTC TGGTGCTGCT GACCCGCGCC TTTCCGCTGG CGATCCTGGC CTTGCCGCTG
ACGGTCTCCT TCATCCGGCT CGGCCTCTAC GATACGATCC TCGGCGTCGG CCTTATCCAT
ACGGTTCTGG CGCTGCCTTT TGCCGCACTC GTCACTCAGG GCATTTTCCT CGGGGTACCC
AAGGAGTTGG AGGAAGCCGC CTGGGTGTTC GGCTGCACCC GCATTCAGGC CTTCTTCAAG
GTGGTGGCAC CCTTGGCCCT GCCGGGCATC GTCGCGACCG CCGTCTTTGC CTTCGTCATC
TCGTGGAACG AGGTTTTTGC CGCCTCGGTA CTGACGGTGC GCAACCGCAC GCTGACCGCC
TACCTGCTGA CCGTGCTTTC GGAAAGCCCG ATGCATTACC GCTTTGCCGG GGGCCTGATG
CTCATCCTTC CATCGGTTGT CTTCATCTTC GCGGTCAGGC GCTACCTCTT CGCGATCTGG
GGCATTTCCT CCAAATAA
 
Protein sequence
MTTDTISTTT DTPKAASFVS SRRWLLWSGI AALCAWVLVP IYLVALGALG GRQGVYVWPK 
TGLPAGISLE PFFLFLKTEG VVQSFLNSLG AAAITVALSI LLGAPAGYAL ARYDFRGKDS
YRLLVLLTRA FPLAILALPL TVSFIRLGLY DTILGVGLIH TVLALPFAAL VTQGIFLGVP
KELEEAAWVF GCTRIQAFFK VVAPLALPGI VATAVFAFVI SWNEVFAASV LTVRNRTLTA
YLLTVLSESP MHYRFAGGLM LILPSVVFIF AVRRYLFAIW GISSK