| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5381 |
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| Symbol | |
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| ID | 8007339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | - |
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| Start bp | 791885 |
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| End bp | 793699 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644822285 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_002973545 |
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| Protein GI | 241113710 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.788293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTG AGTTGCAGAA TGCCATTCTG GAAATGATTG CCAAAGGGGA ACCGCTGGCA
GCAACGATTG AGCAACTTTG CCTCAGGGTC GAGGCCGCCG TTCCTGGGAT CATCGCTTCG
GTGCTGACGT TCGACGGGAG CCGTCTTCAC ACACTTGCCG GACCTTCCCT GCCGCCTGAC
TACTCAGCGG CTGTCGACAA TCTTCAAGCC GGTCCTCTTG CGGGCTCCTG TGGCGCTGCT
GCCTATTTCG GAGAAGCGGT CGTTGTCACC GATATTGAGA CCGATCCTCG TTGGCAGGAT
TTCAAGTCTC TGGTGCTTCC GCTGGGGTTG CGGGCTTGCT GGTCCAGCCC AATCAAGAGC
GGCGGCCGGG TGATCGGCAC CTTCGCCTTC TACTATCGAG ACCGCCGCGG TCCGAAGGTC
GTCGAACGGG ACCTCGTCGA GGCTTGTGCC CATCTCTGCA CGATCGCCAT CGATCGCGAA
GAGCGGGTGA TGGAACGTCA GCGGCTGACA TACAGCGACG CTTTGACGGG CCTGTCTAAT
CGCGCTCGTT TCAACCAGCT TCTCGCCGAA GAGCTGCCTC GATCCCGGCG CGCCTGGGGC
ATCTTGCTTG TTGACATCGA CAACTTGAAA CTCGTGAACG ACACGTTCGG GCACGCAGCC
GGCGACGCAT TGATTCAAGT GGTCGCAGAC CGGGTCGCCA CGACAGCAGG CACCAAAAAC
ACCTTTAGGC TCGGTGGAGA TGAGTTTGCT GTCATTGTGT CGGGCGACAA AAACCTTGAT
CTGAAGGCGA GCGCGACCGA CATCCTCACA GCACTGTCTT CTCCTTCAAC CTGCGACGGT
CATGTCGTCT TTCCCGCCGC GACGATTGGC GGCGCGTTGG CAGAGACGGA AACAAACCCT
GACCAGACCC GCCAGAACGC CGATGTGGCG CTCTATCATG CAAAAGAACA CAATCGCGGC
CGGTACGTGC AACACTATCC CGGCCTGGGC ACCGCCCTGA CCAGACGCTT CAGGGCGGTT
CGGGACGTGG GCGTCGCCCT GAAAGACGAT CGGATCGATG CGCATTACCA GCCGATCTTG
CGCCTGGATA CGCGCGAAAT TGTCGGTTTC GAGGCCTTGT GTCGAATGAC CACGCCTTCC
GGCGAAATCA TAGCCGCAGC GCATTTCCAT GAGGCGACGA AAGACGCGCA TATTGCTGCT
GAGCTGACCG AACGGATGTT GCTGAGGGTT GCGAAAGACA TCCGCAGCTG GCTCGCCCGA
GGCCTTCCTC TCCAGCATGT AGGCATCAAC CTGTCCGCGG CAGATTTTCG TGGCGGTAAT
CTGCAAGACA GGCTGTGCCG AATTTTCGGG GAAGCGGAGG TTCCCCTCAA GCACATCATC
CTCGAAGTGA CGGAATCGGT TTATCTCGGA CAACGGGACT ATGTCGTCGC GGACGAGATA
AAGGCTCTTC GGTCCAAGGG CTTGCGGGTT GCCCTCGACG ACTTTGGCAC GGGTTACGCG
TCTTTGACCC ACCTGCTGAC GGTGCCGGTC GACATCATCA AGATCGACAA GTCCTTCATC
GACCGCATGG TGCCGGGCGA TGCTGGGACC TTCATCGTTG AGGGCTTGAT CGGAATAGCT
CACAAGCTGG GAATCCGGGT CGTCGCAGAG GGGATTGAAA CAGAACCCCA AGCTGCTCAA
TTGAGCCAGC TCGGCTGCAA GCTCGGGCAG GGCTATCTAT TTTCGAAAGC CGTCGATCGA
ACGGTTGCCG CGGCCTTTTT AGAGCAGCAT GGACAACGGC TCAACCAAGA CAAGACCCGT
GCCGGAGCCC TATAG
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| Protein sequence | MILELQNAIL EMIAKGEPLA ATIEQLCLRV EAAVPGIIAS VLTFDGSRLH TLAGPSLPPD
YSAAVDNLQA GPLAGSCGAA AYFGEAVVVT DIETDPRWQD FKSLVLPLGL RACWSSPIKS
GGRVIGTFAF YYRDRRGPKV VERDLVEACA HLCTIAIDRE ERVMERQRLT YSDALTGLSN
RARFNQLLAE ELPRSRRAWG ILLVDIDNLK LVNDTFGHAA GDALIQVVAD RVATTAGTKN
TFRLGGDEFA VIVSGDKNLD LKASATDILT ALSSPSTCDG HVVFPAATIG GALAETETNP
DQTRQNADVA LYHAKEHNRG RYVQHYPGLG TALTRRFRAV RDVGVALKDD RIDAHYQPIL
RLDTREIVGF EALCRMTTPS GEIIAAAHFH EATKDAHIAA ELTERMLLRV AKDIRSWLAR
GLPLQHVGIN LSAADFRGGN LQDRLCRIFG EAEVPLKHII LEVTESVYLG QRDYVVADEI
KALRSKGLRV ALDDFGTGYA SLTHLLTVPV DIIKIDKSFI DRMVPGDAGT FIVEGLIGIA
HKLGIRVVAE GIETEPQAAQ LSQLGCKLGQ GYLFSKAVDR TVAAAFLEQH GQRLNQDKTR
AGAL
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