Gene Rleg_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5312 
Symbol 
ID8006949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp716845 
End bp717873 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID644822218 
Productinner-membrane translocator 
Protein accessionYP_002973478 
Protein GI241113643 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGC TGTTTCTGGC CTATACGACT GAATTCGTGC TGTTTGCCGT CATCATCGCA 
ATGAGTGTTG TCCTCGCTTT TACGACCGAC CGCTTCTTCA CGCTCGGGAA TGGGTTCGAC
CTGCTTAATA TCAGCGCGGT CAACATCATC TTTGCCGTCG GCCTGCTCGT GGTGCTGATA
TCAGGCGGGA TTGACATCTC CTTCGCCGTC GCCGCCTCGA TCGTACAATA TGTCACCGCA
CTTGCGCTCG AGAGGATCGG CGGCGGTGGA TGGCTATCCG GCTTCCTGAT TGCGGCCGGC
ATCGGCATCG TGCTCGGCAT GATCAACGCC TTCCTGATTC ATCGCTTCCG CATCATCTCG
ATCGTCGCGA CGATTGCCAC CTTCAACGTC TATTTCGGCC TGCTGATGTT CTTCACCAAG
GGCGTGTCGA TCTACAATCT GCCCGACTGG CTGACGAGCC GCGTCATTAT CTACGAGCGC
GAAATGGCCG ATGGGAGCTG GGCTGAGATC ACCTTGCCGG TTGTCGTCAT GGCCGTCTGC
ACGCTCGCCA CCTGGTTCTT CATTACCCGC ACGACGACCG GACGGCAGCT CTATGCCTTC
GGCGACAATC CGGAAGGCGC GCGCCGCTTC GGCATCAATA TCGGCGCCAT GCAGTTCATC
GCCTTCGGCT GGCTTGGATT GATGGCAGGC ATCGCCGGTC TCATGCAGGC GCATTATGCG
CAGGAGGTCG TGCCGAACGC ACTTTATGGC CGCGAGCTCG ATGTCCTGGC CGCAGTGGTG
CTCGGTGGGG CGCGGCTGGG CGGCGGCAAG GGCTCCGTGC TCGGTTGCGT GCTGGGCGTG
CTGCTCGTCT CGATCACCCA GAACGGCCTT AACCTAATGG GCGTCTCGCC CTTCGCCTTC
AAGATGATCG TCGGCGCGAT CATCCTCGTT GCGATCACCT TGTCGAGCGC CCGCATCGGC
AATCTGGTGC CGGTGTTTGC GACCCGCAAA TCGACCGGTG ACAGGACTGT AGACAGAGGA
GAGAGCTGA
 
Protein sequence
MRKLFLAYTT EFVLFAVIIA MSVVLAFTTD RFFTLGNGFD LLNISAVNII FAVGLLVVLI 
SGGIDISFAV AASIVQYVTA LALERIGGGG WLSGFLIAAG IGIVLGMINA FLIHRFRIIS
IVATIATFNV YFGLLMFFTK GVSIYNLPDW LTSRVIIYER EMADGSWAEI TLPVVVMAVC
TLATWFFITR TTTGRQLYAF GDNPEGARRF GINIGAMQFI AFGWLGLMAG IAGLMQAHYA
QEVVPNALYG RELDVLAAVV LGGARLGGGK GSVLGCVLGV LLVSITQNGL NLMGVSPFAF
KMIVGAIILV AITLSSARIG NLVPVFATRK STGDRTVDRG ES