Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5273 |
Symbol | |
ID | 8007446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 682604 |
End bp | 683338 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644822180 |
Product | phage shock protein A, PspA |
Protein accession | YP_002973440 |
Protein GI | 241113605 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0710942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACTT GGGGCAAGAT TTTCACCGCC ATTCGCGGCG GCATTAACGA GGCAGCGGAA GCGGCCGCCG ACAGCCAGTC CATGCGCGTC CTTGATCAAG AAATCCGCGA CGCTGAACAG TCGCTGCGCA GTGCGCGATC CGATCTTGCC GGCATCATGG CGTCCAACAA GAGCGTCATG CGCCGACTTG ACGAAAACCG CGCCAAGGAG ACCAAGGATA CCGACAGCGC TCGCGCTGCG ATCTCCGCGA ACCGCACGGA TCTCGCTCAA GGTCTGGCTC AGCGCATTGC TAGTATCCGT GCCGAAGTGC AGCGCGACCA GGAAGAGCTC GACCGGCTGC TGCCTCGCCA GCAGCAGATG CTGCGCACGA TCCAGGAGAC CGAAGCGCGC ATTGCTCAGA TGAAGCGCGA GGTGGGGAAT GTCAAAGCCA ATGAATCGCT GCTGCGCGCT CAATCGGCGA TCGCCCATAG CCAGTCGGGC ATCAATACCC GCCTCGGTAG CGCCGTCGAG AGTCTCGAAC GCATCAAGAA ACGCCAGGAA ATCACTGCCG GCCGCATCGA AGCCGGTGCT GAACTGGCCG CGCTGGAAAA CGGCAGCGAC CTCGATCGTC AACTGCGCGA GGCCGGCATT GGCAGTTCGA GCCACTCGGC CGATGACATT CTTGCACAGC TGATGGCACC GAAACATTCG GTAGAGCCCA TCTTGCTGCC AGCGCCGACC AGCAAAAAAG ACTGA
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Protein sequence | MSTWGKIFTA IRGGINEAAE AAADSQSMRV LDQEIRDAEQ SLRSARSDLA GIMASNKSVM RRLDENRAKE TKDTDSARAA ISANRTDLAQ GLAQRIASIR AEVQRDQEEL DRLLPRQQQM LRTIQETEAR IAQMKREVGN VKANESLLRA QSAIAHSQSG INTRLGSAVE SLERIKKRQE ITAGRIEAGA ELAALENGSD LDRQLREAGI GSSSHSADDI LAQLMAPKHS VEPILLPAPT SKKD
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