Gene Rleg_5200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5200 
Symbol 
ID8007095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp611431 
End bp612246 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID644822109 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973369 
Protein GI241113534 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.685712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0825161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA AGACGCTCGA TCGCATCGGA CTGCTGTTTG TTGCCCTGGT GATGATATCG 
CCGGTCGTCC TGTTCTTCCT CTGGATGATT TCCCTGTCGC TGAAATATGA AATCGACAGC
GGCGCTTATC CACCGATCTT CATCCCGGAG CGCTTTGCCT GGTCGAACTA TCTGAAGGTC
TTCGAAGAGA ACAACTTCTT CCTCTATCTC TGGAATTCGG TGCTGGTGAC GGGTGCCGCC
ACACTTCTGG CGCTACTGAT CGGCGTGCCG GCCGGATATG GCATCGCGCG GCTGAAGGCC
GAGAAGTCTG CGATGGTCAT CATGATTGCG CGCATGACGC CGGGCCTTTC GTTCCTGATC
CCGCTCTTCC TACTGTTCCA ATGGCTGAAC CTGCTCGGCA CGCTCTTGCC GCAGATCATC
ATCCATCTCG TCGTCACAGT GCCGATCGTC GTGTGGATCA TGATCGGTTA CTTCGAGACG
ACGCCGATGG AACTGGAAGA GGCTGCAAGC ATCGACGGTG CAACACCCTG GCAGGTTTTC
CGGCTGGTCG CCTTGCCGAT CGCCAGGCCA GGCATTGTCG TCGCCTTCAT CCTGTCGGTC
ATCTTCTCGT GGAACAATTT CGTCTTCGGC ATCGTGCTCG CCAGTCGCGA GACGCGCACG
CTCCCCGTCG CGGTCTACAA CATGCTCTCG TTCGAGCAGG TCAGTTGGGG TCCGCTGGCG
GCGGCGGCGT TGATCGTGAC CTTGCCCGTG CTGATTTTGA CGGTGTTTGC GCAACGGCAG
ATCGTGGCGG GTCTGACGGC CGGAGCCGTC AAGTGA
 
Protein sequence
MKRKTLDRIG LLFVALVMIS PVVLFFLWMI SLSLKYEIDS GAYPPIFIPE RFAWSNYLKV 
FEENNFFLYL WNSVLVTGAA TLLALLIGVP AGYGIARLKA EKSAMVIMIA RMTPGLSFLI
PLFLLFQWLN LLGTLLPQII IHLVVTVPIV VWIMIGYFET TPMELEEAAS IDGATPWQVF
RLVALPIARP GIVVAFILSV IFSWNNFVFG IVLASRETRT LPVAVYNMLS FEQVSWGPLA
AAALIVTLPV LILTVFAQRQ IVAGLTAGAV K