| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5172 |
|---|
| Symbol | |
|---|
| ID | 8007068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 577620 |
|---|
| End bp | 578717 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644822082 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973342 |
|---|
| Protein GI | 241113507 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.285903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.173747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAGCG CCGATCTGAC ATCGAAGTCT GAGAGCAGCC GTGGTTCCAC GGAGGGCGGG
TTCGCCGAGG CGGCCCCGCA CCCGGCGCTG AGCCTGCTGC GGCGCCTGGC GGGACGCGTC
GTGGCAGTCG TGACGACGCT GCTTGGCCTG CTCTTCCTGA CCTTCTCGAT GGGCCGCCTG
CTGCCCGCCG ACCCGGTGCT CGCCATCACC GGGGCGGAGG TCAGCAAGGA TGTTTACGAT
CGCGTCTATA ACGAGCTGGG TCTCGGGCAG CCGATCTGGA TGCAGTTCCT CTCCTACGTC
GGCAAGATCG CCACAGGCGA TCTCGGCATG TCGGCGACGA CGGGCCAGCC GATCCTCACC
GATCTCCTGA CAATCTTTCC CGCAACGATC GAACTTGCGA TCATCGCCAT GATCATCGGG
GCGATCGTCG GCATTCCCTT AGGGATCACC GCCGCGGTCA GGCGGGGAAC CGTTATCGAC
CACATTGCGC GGATCGTCGC CCTTGCCGGC CACTCCATCC CGATCTTCTG GACCGGGCTG
ATGGCACTCT TCGTCTTTTA TGCGAAGCTG AAGCTCGTCG GCGCCTCGGG CCGGATCGAT
GTCTTCTATG AAGGCCTCGT CACGCCGATG ACGGGCTTTC TCCTGATCGA CGCAGCGATT
CAGGGCCAAT GGGACGTGTT TTACAACGCC CTTGGCCACA TCATCCTGCC GGCCGCCATC
CTCGGCTACT ATTCCGTCGC CTATATCAGC CGCATGTCGC GAAGCTTCAT GCTGGAGCAA
CTGAGCCAGG AATACATCAT CACCGCCCGG GCCAAGGGGC TTGGCACCCG CAAGGTGGTC
TGGCGCCATG CATTCAAGAA CATCCGCGTA CAGCTCCTGA CGATCATGGC GCTGACCTTC
GGCGGGCTGC TCGAAGGCGC GGTGCTGATC GAGACCGTCT TCGGGTGGCC GGGGCTCGGC
CAGTACCTGA CGCGGGGGCT GCAGATGAAC GACATGAACG TGGTCATGGG TTCGGTGCTG
ACGATCGGCG CCGTCTTCCT GACGATCAAC ATCCTGTCGG ACTTCCTTTA TCGCATTCTT
GATCCGAGGA CACGGTGA
|
|---|
| Protein sequence | MASADLTSKS ESSRGSTEGG FAEAAPHPAL SLLRRLAGRV VAVVTTLLGL LFLTFSMGRL
LPADPVLAIT GAEVSKDVYD RVYNELGLGQ PIWMQFLSYV GKIATGDLGM SATTGQPILT
DLLTIFPATI ELAIIAMIIG AIVGIPLGIT AAVRRGTVID HIARIVALAG HSIPIFWTGL
MALFVFYAKL KLVGASGRID VFYEGLVTPM TGFLLIDAAI QGQWDVFYNA LGHIILPAAI
LGYYSVAYIS RMSRSFMLEQ LSQEYIITAR AKGLGTRKVV WRHAFKNIRV QLLTIMALTF
GGLLEGAVLI ETVFGWPGLG QYLTRGLQMN DMNVVMGSVL TIGAVFLTIN ILSDFLYRIL
DPRTR
|
|---|
| |