Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5076 |
Symbol | |
ID | 8007669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 460429 |
End bp | 461712 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644821991 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002973251 |
Protein GI | 241113416 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.340965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.383073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT ATCTCTCAGG GGCCGTCGCA CTGGCGTTGG CAACCGTTTC TTTCGCATGG GCCGGCGCGG CCATGGCGCA AACCAAGACA ATCACCTTTC TGTTCACCGA CGACGACCAG GCTTACGTCG AGCGCATGGA AGCGCTCAGC AAGGAATTCG AGACGGCGAA TCCCGACGTC AAGGTCAACT TCGTCTCTTC GGGCTATGAT GCGGTCGCCA AGCAGCTGCC GGTGCAGCTT GCCGTCGGCG AGGGCCCTGA CATCGCCAAG ATCACCGACT GGCAGCTTGC GCCCTATTAC CTCGACATGC GTCCCTACAT GAAGGACCCG GATGGCTTCG CCAAGCTGCA CGGCGACAGC CTGAACACGC TTCGCTTCCC CGGCGTCAAC GATCCGCAGT CGATCAACGG CTATATCGCC TCGCAGACCT TCAACCTGCC CTTCGTCAAC AAGACGCTGT TCGAACAGGC CGGCGAACCG CTTCCCAAGC CCACCGCCAC GCTGAAGGAT ATCGTCGAAG CCTCGGCGCG CGTCGCCAAG GCGACCGGCG CTCAGATCCC CTTCACGATG GACCGCTCGG GCCACCGCTT TTCCGGCGCG GCATTCTCCT ACGGTTCGAA CTACGTCAAG GACGGCAAGT TCTTCTTCCC CGACGATGCC GCCAAGCGCT ACGTCACGGA TCTCTACGGT TGGACGAAGG ACGGCTCCTT CCCGAAGGAA ATGTGGGGTG CTGCCGGGGG AACCCAGTAC AAGAACATGG GTGACGAGTT CGTCAACGGC AACGTCGTGA CCTATCTCGC CGGCAACTGG ATGGTCAATC CGTTCCAGAA GAAGATCGGC GACGCCTTCG ACTGGACGGC GATCAGCGCG CCCTGCGGCG ATGCCGGCTG CTATGCGATG CCCGGTGGCA CCGCGATCGT TGGCTTCAAG CGCACCAAGT CTCCCGAGGC CGTGGCCGCG TTCATCGAGT TCCTCGGCTC TGAAAAGGTC CAGCGTGAAA TCGCTGAAAA TTACGTCGTC CTGACGGGCG CCGACATCAA GGACCCGCAA TACAAGCTTG AGAGCAAGAA TGCCAAGGAG GCGATGGCCG TCTTTCTTGG AAGCCGCAAT AGCGTGCCGC AGGCAGCCCG GGACCTGGAA CGTCTCAAGG GATCCTCCGC CATCTATCAG CTCATCGTCC AGAGGATGAG CCAGCTGATC GTCGGCGAGC TTTCCCTCGA CGAGACCTTC AAGGCGATGA ATGCCGACGT CGACAAGGTC AACCAGGCGC TCGCCGCCAA GTAA
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Protein sequence | MKTYLSGAVA LALATVSFAW AGAAMAQTKT ITFLFTDDDQ AYVERMEALS KEFETANPDV KVNFVSSGYD AVAKQLPVQL AVGEGPDIAK ITDWQLAPYY LDMRPYMKDP DGFAKLHGDS LNTLRFPGVN DPQSINGYIA SQTFNLPFVN KTLFEQAGEP LPKPTATLKD IVEASARVAK ATGAQIPFTM DRSGHRFSGA AFSYGSNYVK DGKFFFPDDA AKRYVTDLYG WTKDGSFPKE MWGAAGGTQY KNMGDEFVNG NVVTYLAGNW MVNPFQKKIG DAFDWTAISA PCGDAGCYAM PGGTAIVGFK RTKSPEAVAA FIEFLGSEKV QREIAENYVV LTGADIKDPQ YKLESKNAKE AMAVFLGSRN SVPQAARDLE RLKGSSAIYQ LIVQRMSQLI VGELSLDETF KAMNADVDKV NQALAAK
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