Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5004 |
Symbol | |
ID | 8007595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 388793 |
End bp | 389659 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644821919 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002973179 |
Protein GI | 241113344 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA CAAGTTCCGA AACCACCTCC GGCCGGCTGT CCGGAACCCG GTTTGGCTAT CGCTTCAACA TCGTCGGCGC GATTGGCTTC ACTGTGATCC TCTCATGGGC GCTCGTTGCG ATCTTCGCGC CATGGGTCAT CCCCTACCCC GTCGGCGAGA TTATCGATCT CGACTATTTC GGCCCGATGA GTCGGGAACT CTGGCTCGGC TCCGATTATC TCGGCCGCGA CATGCTCTCG CGGATTCTGA TGGGCGCCCG GTATACAGTC GGTATCTCGC TCGCTGCGGT CACGATCGCC TGCTTCAGCG GCGTCGTGCT CGGCATGATC GCAGCGGTCG CCGGCGGCTG GCTGGACACG ATCCTCAGCC GCTTCCTCGA CGCCCTCAAC TCCATCCCGA GCAAGCTGTT CGGCCTGGTG GTCGTCGCTG CCGTCGGCTC CTCGGTCCCG GTGCTGATCA TGACGCTGTC GGTGATCTAT ATCCCAGGCG CTTATCGCTT CGCCCGGGCG CTCGCCGTCA ACATCAACGC GATGGATTTC ATCACGGTTG CGCGCATCCG CGGTGAAAGC ACTCTCTATC TCATTCGCTC GGAAATCCTG CCCAACATCG TCGGGCCGGT GCTTGCCGAT CTCGGCATCC GCTTCGTCTT CATCGTTCTG CTGCTCTCCG GGCTTTCCTT CCTCGGTCTC GGCGTCCAGC CGCCCTATGC CGATTGGGGT GCGCTCGTAC GTGAGAACAT CGGCGGCCTG CCATTCGGTG CGCCGGCGGT GATGTTTCCC TCGCTTGCCA TCGCCAGCCT GACGATCAGC GTCAACCTGC TGATCGACAA CCTGCCGCAG AAAATTCGCG ACCGGAGCAC GTCATGA
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Protein sequence | MTMTSSETTS GRLSGTRFGY RFNIVGAIGF TVILSWALVA IFAPWVIPYP VGEIIDLDYF GPMSRELWLG SDYLGRDMLS RILMGARYTV GISLAAVTIA CFSGVVLGMI AAVAGGWLDT ILSRFLDALN SIPSKLFGLV VVAAVGSSVP VLIMTLSVIY IPGAYRFARA LAVNINAMDF ITVARIRGES TLYLIRSEIL PNIVGPVLAD LGIRFVFIVL LLSGLSFLGL GVQPPYADWG ALVRENIGGL PFGAPAVMFP SLAIASLTIS VNLLIDNLPQ KIRDRSTS
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