| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4877 |
|---|
| Symbol | |
|---|
| ID | 8007264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 257620 |
|---|
| End bp | 259209 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644821806 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_002973066 |
|---|
| Protein GI | 241113231 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.386958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.659358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATG CCGCCGACCT TCCCGATGAT GTTGCTGCTC TGAAGGCGAT GCTGATCGCG
GCGCAGGCAC GCGAGGCGGC CAAGGACTCT GCGATAGCCA GCAAGGACGA GCATATCGCC
CGCAAGGATG AGCGGATCGA ACGGCTTGAG AAGCTGGTCG AAGCCTTCAA ACAGGCCGCC
TTCGGACGCA AGTCCGAGAA GACCGATCCG GACCAATTCG ATCTGGCACT GGAAGACCTG
GAAACGGCTA TGGCCGTGAT CCATGCCGAG GATGAGGCGG ACACCCCGGC GGCAAACAGG
CTTGCCAAGC CACGCGCGAT CAACCGTGGC TCCCTTCCAA AGCATCTTCC GCGTGTTGAG
GAGGTGATCG AGCCGGACAG CCTCATCTGC GGCTGCGGCG GTTGTCTGCA TTGCATTGGC
GAGGATGTCT CCGAGCGGCT GGACGTGGTC CCGGCGCAGT TCCGCGTCAT CGTCACCCGT
CGCCCCAAAT ATGCATGCCG GGTCTGCACC GACGGCGTCG TTCAGGCCCC GGCTCCAGCA
TGGCTGATCC AGGCTGGGCT GCCGACGGAA GCGACCGTCG CCCATGTGCT GGTCTCCAAA
TATGCCGATC ACCTTCCGCT CTATCGGCAG GCCCAGATCA TGAGCCGTCA GGGCATCGAT
CTCGACCGAT CAACGCTGGC CGATTGGGTC GGTCGGGCAG CCTATGAACT GCGGCCCGTT
TTCGATGCGT TGATTGAAGA CCTGAAGCGC TCGACCAAGC TGTTCATGGA CGAGACCCGT
GCTCCAGTTC TCGATCCTGG TTCTCGTAAG ACCAAGACCG GATACTTCTG GGCGCTGGCG
CGTGATGATC GTCCATGGGA CGGCGGTGCT CCGCCAGGGG TCGCCTTCAC CTATGCGCCC
GGTCGCGGAG GCATTCATGC CGAACGGATA TTGCAGGGCT TCTCGGGCAT TCTGCAGGTC
GATGGATATG CCGGATACAA CAGGCTGATC GCACCGGAGC GTGTCGGTCC TGACATCCAG
CTTGCCTATT GCTGGGCGCA TGCCCGGCGC AAACTGGTGG AGATCACCCG CAACGGCTCA
GCACCGATTG CCGAGGACGG CATCAAACGG ATCGGCGAGC TGTATCGCAT CGAAGCAGAA
CTACGCGGCC TTGATCCGCA GGCTCGACTC GCTGGACGGC AGGAGCGGTC CGCGCCACTG
ATCGTCGACA CACAGACTTG GCTTGTCCAT CACCGCGCTA GGGTCGCGGC AAAGTCCCCG
CTCGGCGAAG CCTTGGCCTA CATCGCCAAA TACTGGGACG GCCTGCAGCT ATTCCTGACC
GACGGCCGCA TCGAGATCGA CAACAACAGC GTCGAGCGGA CCATCAGGCC CATTGCCCTC
AACCGGAAGA ACGCACTCTT TGCGGGCCAT GACGCCGGAG CCGAGAACTG GGCGACCATC
GCCTCGCTCA TCGAGACCTG CAAGCTGAAC GCCGTCGATC CGCTGGCTTA TCTGACCGCC
ACGCTCACTG CCATCGTCAA CGGCCATAAG CAGAGCCGGA TCGGCGAGCT TCTGCCATGG
AATTACAGGG GTGCGTCCAA GCTCAGCTAA
|
|---|
| Protein sequence | MLDAADLPDD VAALKAMLIA AQAREAAKDS AIASKDEHIA RKDERIERLE KLVEAFKQAA
FGRKSEKTDP DQFDLALEDL ETAMAVIHAE DEADTPAANR LAKPRAINRG SLPKHLPRVE
EVIEPDSLIC GCGGCLHCIG EDVSERLDVV PAQFRVIVTR RPKYACRVCT DGVVQAPAPA
WLIQAGLPTE ATVAHVLVSK YADHLPLYRQ AQIMSRQGID LDRSTLADWV GRAAYELRPV
FDALIEDLKR STKLFMDETR APVLDPGSRK TKTGYFWALA RDDRPWDGGA PPGVAFTYAP
GRGGIHAERI LQGFSGILQV DGYAGYNRLI APERVGPDIQ LAYCWAHARR KLVEITRNGS
APIAEDGIKR IGELYRIEAE LRGLDPQARL AGRQERSAPL IVDTQTWLVH HRARVAAKSP
LGEALAYIAK YWDGLQLFLT DGRIEIDNNS VERTIRPIAL NRKNALFAGH DAGAENWATI
ASLIETCKLN AVDPLAYLTA TLTAIVNGHK QSRIGELLPW NYRGASKLS
|
|---|
| |