| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4848 |
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| Symbol | |
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| ID | 8007236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | - |
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| Start bp | 225527 |
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| End bp | 227524 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644821778 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002973038 |
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| Protein GI | 241113203 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.162589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTACT TTTCAACATA CTTTAGATGG TTGTCAGGCC GGTGTTATTG CATGATCGCG
CCTTACGCTA ATGTCCAGCA CGACGAATCC ACCGCCAGTT TTTCATTCGC TGAGGCCCTC
AAGTCTCTGA AAACTGAAAA TGATGCTGTC CGAAGGCGGA GCTCACGGCA TGGTCTTTGG
ATCGCGGTTG CCGTTTATGT GGCCTTCGCA CTTCCCGACC GATGGCTGAT CCCCGATGTC
GCCCCTGTGA CGATCGCCGC GCGATTCGTC GTTGCAACGA TCGCGCTGCT GGTTTTCGAG
ACCCTGCGCC TGGCAAACGC GAAAACCGTC TGGCTTGACA TCACATGTGC CACTGCACTT
CTTGTGGGCT ATGTGGGCTG GCTTTACCCG GCGATTGCCA CACGCGACGT CACCGCCATG
TCATACTACA TGATATTCGG CGCCATCTTC ATGATGGGCG CCAACCTGTT TTTCAGTTTC
CCGTTTCGGC TTTCGGTGAT CACCTCGGGC CTCGTTCTAT GCGCATTTTT CATTACGATC
GTGGAATTTT TTCCTTCAAG CGAGACCTAC AAGCTTGCCT TCGGCATGTT CTACATTTCG
TGCTTTGCCT TCACGTCGTT CGTCAATTGG CGATTGAACG TGGAGCGTCG AAATGTGTTG
CTGAACGCGG CGGAAGCTCG CCACCAGCAT TGGGAAGCGT CCGAGCGCGG AAGGTCACTG
CTCGAGCTTT CACATACTGA CTACCTGACA GGCATAGGCA ACAGACGCGC GCTGGATCGG
CGGCTCGACG AATGCTGGGC CGCCTGGAAA GACGAACGCC GCGACTTCTC CGTGTTCCTC
ATCGACGTCG ACTTTTTCAA ACGCTTCAAT GATCGCTACG GACATCAGGA AGGAGACCGA
TGCCTGACTG TCATCGCCAA TGCGCTGAAG GCGGTTGTCG GGTCGTCGGA TGGCATGATC
GGCAGGTATG GTGGCGAGGA GTTTATCGTG GTCATGCCGG CTGCCCTTCC CAAGGTTGCG
ATGACTCTCG CCGAGAAGAT CAGAATGGAA GTCGAGTCTT TGGCGATTGC TCACGACGAG
CGACCAGATG ATATGTCGAC CGTAACCGTC AGCATCGGCG TCGCCTTCAC CCGCGAGAAA
GTTGGAGAGA AAGTTGAACG AATAGTCCGT GAAGCCGACC TTGCTCTCTA CAATGCCAAA
GCAAGTGGCC GAAACTGCAT TCGCAGTTTT GATCCGTTTT TGCCTCGCCC CGACGACCAT
GCTGGCAAAC TCGTCCCGCT GCTGGCGGCC GCCATCGATC GCAAACTGGT CTCGCTCGTG
TACCAACCGA TCTTCGACGT GACGAACGGG AAAGCAAGGG CTGTCGAGGC TTTGATGCGC
CTCAGGATGC CGGACGGCAC CGCGATTTCG CCGAAGACAT TCATCCCGGT TGCCGAACGA
AGTGGTGCTA TCCTCGAACT GGGCAGGTGG GCGATCGAGA CGGCATGCCG GGATATACTG
ATGACCGATC GCATGGCGAC CGTCAGCGTC AACGTGTCGC CGATACAACT GCGTTCCCCC
GGCTTTGCTG CCAGTGTCGC TGATATCCTT GATCGGTGCG GGGTTTGCGG GTCGCGACTA
GCCTTGGAAG TCACCGAGGG CCTGGACATG GATATGCAGT CGGAGGTGCT TAAATGCATT
GCCGATCTGC GGGCACTCGG CGTCGAGATC TGGCTTGACG ACTTCGGCTG CGGTTTCGCG
GGCCTCTCTT GGCTGAGGGC AATCGAGTTT CAGACGGTCA AAGTCGACAG AACCTTCCTG
CACGACTGCT CGAACCCACG CGGTCTGACG ATGCTTCAGG ACATGATTGC TCTCATCCGC
AATCGTGGGA ATACGATCCT GGTGGAAGGC GTCGAAACTG CAGCACAATT TTCCCTTCTC
AAGGATCTTC GCATCGACCG CGTCCAGGGC TTTCATATGG GAATGCCGGT TAGCGCTGAA
CTTCTGAACG CGGCTTAA
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| Protein sequence | MAYFSTYFRW LSGRCYCMIA PYANVQHDES TASFSFAEAL KSLKTENDAV RRRSSRHGLW
IAVAVYVAFA LPDRWLIPDV APVTIAARFV VATIALLVFE TLRLANAKTV WLDITCATAL
LVGYVGWLYP AIATRDVTAM SYYMIFGAIF MMGANLFFSF PFRLSVITSG LVLCAFFITI
VEFFPSSETY KLAFGMFYIS CFAFTSFVNW RLNVERRNVL LNAAEARHQH WEASERGRSL
LELSHTDYLT GIGNRRALDR RLDECWAAWK DERRDFSVFL IDVDFFKRFN DRYGHQEGDR
CLTVIANALK AVVGSSDGMI GRYGGEEFIV VMPAALPKVA MTLAEKIRME VESLAIAHDE
RPDDMSTVTV SIGVAFTREK VGEKVERIVR EADLALYNAK ASGRNCIRSF DPFLPRPDDH
AGKLVPLLAA AIDRKLVSLV YQPIFDVTNG KARAVEALMR LRMPDGTAIS PKTFIPVAER
SGAILELGRW AIETACRDIL MTDRMATVSV NVSPIQLRSP GFAASVADIL DRCGVCGSRL
ALEVTEGLDM DMQSEVLKCI ADLRALGVEI WLDDFGCGFA GLSWLRAIEF QTVKVDRTFL
HDCSNPRGLT MLQDMIALIR NRGNTILVEG VETAAQFSLL KDLRIDRVQG FHMGMPVSAE
LLNAA
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