Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4557 |
Symbol | |
ID | 8015312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4684938 |
End bp | 4685537 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644827134 |
Product | 2',5' RNA ligase |
Protein accession | YP_002978334 |
Protein GI | 241207238 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0162437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA TGCCCTTCGA CTTCGGAGAC GACAAAAATG GTCGCGGACG GCGGAACGAA AGCTACGTCA GCGGACACCG ACTTTTCTTT GCGCTCTGCC CTCCTGATGC CGTCGAGCAG CAGGCGGCCG CAATCGGCGA TGACTATCGT CGAGCCTTCT CCCTTTCCGG GATGCCGCGC CTGACGACAT TGCATGTGTC GATCATCTGG GTCGGCGACT ATCCGAGGCT GCCGGAGGAT GTGGTCTTCG CGGCACGACA GGCCGGCGCC ACAGTCGAGA GTGCCCCGAT CGCAATAAGC TTCGACCGGA TCATGCGATT CCCGCAGGCG CGTTCGCTTG TGCTTTGCGG CGAAGGCGGA CGGAAACCAC TGACACGGCT GCACGTCCAA TTGGGCGTCG GCATGTACAA TGCCGGCTTG CGGCACAATG TCGGCCGCGA CTACAAGCCG CACATGACAC TTCTCTATGA CCGCAAAGCC GTGCCGCCGA CGACCCTCGA CACACCCGTT TCATGGACCG CGTCCGAATT CCTGCTCATC CACAGTGTTC TCGGAAAAAC CGAACATCGG ATCATCGATC GCTGGCCGCT GCTCGGCTGA
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Protein sequence | MNQMPFDFGD DKNGRGRRNE SYVSGHRLFF ALCPPDAVEQ QAAAIGDDYR RAFSLSGMPR LTTLHVSIIW VGDYPRLPED VVFAARQAGA TVESAPIAIS FDRIMRFPQA RSLVLCGEGG RKPLTRLHVQ LGVGMYNAGL RHNVGRDYKP HMTLLYDRKA VPPTTLDTPV SWTASEFLLI HSVLGKTEHR IIDRWPLLG
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