Gene Rleg_4557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4557 
Symbol 
ID8015312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4684938 
End bp4685537 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content61% 
IMG OID644827134 
Product2',5' RNA ligase 
Protein accessionYP_002978334 
Protein GI241207238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0162437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA TGCCCTTCGA CTTCGGAGAC GACAAAAATG GTCGCGGACG GCGGAACGAA 
AGCTACGTCA GCGGACACCG ACTTTTCTTT GCGCTCTGCC CTCCTGATGC CGTCGAGCAG
CAGGCGGCCG CAATCGGCGA TGACTATCGT CGAGCCTTCT CCCTTTCCGG GATGCCGCGC
CTGACGACAT TGCATGTGTC GATCATCTGG GTCGGCGACT ATCCGAGGCT GCCGGAGGAT
GTGGTCTTCG CGGCACGACA GGCCGGCGCC ACAGTCGAGA GTGCCCCGAT CGCAATAAGC
TTCGACCGGA TCATGCGATT CCCGCAGGCG CGTTCGCTTG TGCTTTGCGG CGAAGGCGGA
CGGAAACCAC TGACACGGCT GCACGTCCAA TTGGGCGTCG GCATGTACAA TGCCGGCTTG
CGGCACAATG TCGGCCGCGA CTACAAGCCG CACATGACAC TTCTCTATGA CCGCAAAGCC
GTGCCGCCGA CGACCCTCGA CACACCCGTT TCATGGACCG CGTCCGAATT CCTGCTCATC
CACAGTGTTC TCGGAAAAAC CGAACATCGG ATCATCGATC GCTGGCCGCT GCTCGGCTGA
 
Protein sequence
MNQMPFDFGD DKNGRGRRNE SYVSGHRLFF ALCPPDAVEQ QAAAIGDDYR RAFSLSGMPR 
LTTLHVSIIW VGDYPRLPED VVFAARQAGA TVESAPIAIS FDRIMRFPQA RSLVLCGEGG
RKPLTRLHVQ LGVGMYNAGL RHNVGRDYKP HMTLLYDRKA VPPTTLDTPV SWTASEFLLI
HSVLGKTEHR IIDRWPLLG