Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4448 |
Symbol | |
ID | 8015214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4582169 |
End bp | 4583317 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827023 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002978225 |
Protein GI | 241207129 |
COG category | [R] General function prediction only |
COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCCG CCGCAAATCC CGCTGTCACG ACGCCCGTCA AGCCGCCGCG CAAAGGCCTG CTCTCGCCGA CCAACATTCG CCGCTGGCAG AATTTCCGCG CGAACGGCCG CGGTTACTGG GCGCTGTGGC TGTTCATGGT CTTGTTTATC CTCAGCCTGT TTGCCGAGTT CCTCGCCAAC GACCGGCCGA TCATCGCTTC CTACAAGGGC GAGATCCTGT TCCCTGTCCT CGTCGATTAT CCCGAGGAGA AGTTCGGCGG CTTCCTGGCC GAAACCGACT ACCGTTCCTC GGTCATAACG GACGAGATCA ATGCCAATGG CTGGATGATC TGGCCGCCGA TCCGCTATTC CTACCGCTCG GTCAATTCCA ACATTCCGCA TTCGGCCCCC ACCGCTCCCT TCTGGCTGAT GACGAAGGAG GAGCGTTGCG CCGGTTATCC GCAAGGGGTG AACGATCCGG ATTGCACCCT CGGCAATCTC AACTGGCTCG GCACTGACGA CCAGGCGCGA GACGTGCTGG CGCGCGTCAT CTACGGCTTT CGCATATCGG TGCTCTTCGG CCTGGTGCTG ACCATCTGCT CGGCGGTCAT CGGCGTGACG GCCGGTGCGG TGCAAGGCTA TTTCGGCGGC TGGACAGATC TGCTGTTGCA GCGCTTCATC GAGATCTGGT CGTCGATGCC GGTGCTCTAC ATCCTGCTGA TCATCGCCGC ACTCCTGCCG CCCGGCTTCT TCGTGCTGCT CGGCATCATG CTGCTGTTCT CCTGGGTCGG TTTCGTCGGC ATCGTGCGCG CCGAATTCCT GCGCGCCCGC AATTTCGAAT ATGTCCGCGC CGCCCGCGCG CTCGGCGTCA ACAATCGCAC CATCATGTGG CGGCACCTGC TGCCGAACGC CATGGTCGCG ACGCTGACCT TCCTGCCCTT CATCCTCTCC GGCTCGATCA CGACGCTGAC CTCGCTCGAT TTCCTCGGCT TCGGCATGCC GCCGGGCTCC CCCTCGCTCG GCGAGATGAT CGCTCAGGGC AAGACCAATC TGCAGGCGCC GTGGCTCGGG CTGACGGCCT TCTTTGCCAT GTCGATCATG CTTTCCCTGC TGATCTTCAT CGGCGAAGCC GTGCGCGATG CCTTCGATCC GAGGAAGACG TTTCAATGA
|
Protein sequence | MDAAANPAVT TPVKPPRKGL LSPTNIRRWQ NFRANGRGYW ALWLFMVLFI LSLFAEFLAN DRPIIASYKG EILFPVLVDY PEEKFGGFLA ETDYRSSVIT DEINANGWMI WPPIRYSYRS VNSNIPHSAP TAPFWLMTKE ERCAGYPQGV NDPDCTLGNL NWLGTDDQAR DVLARVIYGF RISVLFGLVL TICSAVIGVT AGAVQGYFGG WTDLLLQRFI EIWSSMPVLY ILLIIAALLP PGFFVLLGIM LLFSWVGFVG IVRAEFLRAR NFEYVRAARA LGVNNRTIMW RHLLPNAMVA TLTFLPFILS GSITTLTSLD FLGFGMPPGS PSLGEMIAQG KTNLQAPWLG LTAFFAMSIM LSLLIFIGEA VRDAFDPRKT FQ
|
| |