| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4403 |
|---|
| Symbol | |
|---|
| ID | 8015174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4530536 |
|---|
| End bp | 4531390 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644826978 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_002978180 |
|---|
| Protein GI | 241207084 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA AGACCAACAG GATCGCCTTC CAGGGCGAAT TCGGCGCCAA TTCCGACATG
GCCAGCCGCG ACATGTTTCC GACCATGGAG CCGCTGCCCT GCCAGACCTT CGAGGATGCG
TTCACGGCGG TCGACAACGG CGATGCCGAT ATCGGGATGA TCCCGATCGA GAACACGATC
GCCGGGCGCG TCGCCGATAT CCACCATCTG CTGCCGGAGT CGCGGCTGCA CATCATCGGC
GAATATTTCA TGCCGATTCG CTTCCAGCTG ATGGTACTGC CCGGTGTTAC CAAGGACGAG
ATCCGCACGG TCCACAGCCA TATCCACGCG CTCGGCCAGT GCCGCAAGAT TGTTCGCGCC
AATGGCTGGA AACCGGTGAT CGCCGGCGAT ACCGCAGGGG CGGCAAAGCT CGTGCAGGAA
ACCGGCGACC GCTCGATGGC CGCCTTGGCG CCCCGCCTTG CCGCCGATCT CTACGGGCTC
GAGATCATCG CCGAAAATGT CGAGGATACG GAAAACAATG TGACCCGTTT CGTCGTTCTG
TCCCGCGACG AGGAATGGGC GCAACGGAAT TCGGCGGAAG AAAAGGTCGT CACCACCTTC
GTCTTCAACG TCCGCAACAT TCCGGCCGCG CTCTACAAGG CGCTCGGAGG TTTTGCCACC
AACAACATCA ACATGACGAA GCTCGAAAGC TACCAGCTCG GCGGAAAATT CGTGGCGACG
CAGTTTTACG CCGATATCGA AGGCCATCCG AACGATCCGA ACGTGCGCCG GGCATTGGAG
GAACTGCGGT TCTTTTCCGA GAAAGTGCGC ATCCTCGGCG TCTACAAGGG GCATGCGATG
CGAGGCCTGC TTTAG
|
|---|
| Protein sequence | MNIKTNRIAF QGEFGANSDM ASRDMFPTME PLPCQTFEDA FTAVDNGDAD IGMIPIENTI
AGRVADIHHL LPESRLHIIG EYFMPIRFQL MVLPGVTKDE IRTVHSHIHA LGQCRKIVRA
NGWKPVIAGD TAGAAKLVQE TGDRSMAALA PRLAADLYGL EIIAENVEDT ENNVTRFVVL
SRDEEWAQRN SAEEKVVTTF VFNVRNIPAA LYKALGGFAT NNINMTKLES YQLGGKFVAT
QFYADIEGHP NDPNVRRALE ELRFFSEKVR ILGVYKGHAM RGLL
|
|---|
| |